RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 SENP8Q96LD8 212 aa18.43■□□□□ 0.54
TOP3B-217ENST00000489581 ZSCAN31Q96LW9 406 aaPredicted RBP18.43■□□□□ 0.54
TOP3B-217ENST00000489581 RPF1Q9H9Y2 349 aaKnown RBP18.43■□□□□ 0.54
TOP3B-217ENST00000489581 ASB3Q9Y575 518 aa18.43■□□□□ 0.54
TOP3B-217ENST00000489581 XPOTO43592 962 aaKnown RBP18.42■□□□□ 0.54
TOP3B-217ENST00000489581 PAPSS2O95340 614 aaPredicted RBP18.42■□□□□ 0.54
TOP3B-217ENST00000489581 PLA2G4BP0C869 781 aa18.42■□□□□ 0.54
TOP3B-217ENST00000489581 LIG4P49917 911 aa18.42■□□□□ 0.54
TOP3B-217ENST00000489581 LILRA4P59901 499 aa18.42■□□□□ 0.54
TOP3B-217ENST00000489581 TNK2Q07912 1038 aa18.42■□□□□ 0.54
TOP3B-217ENST00000489581 ENOX2Q16206 610 aaKnown RBP18.42■□□□□ 0.54
TOP3B-217ENST00000489581 ARHGAP15Q53QZ3 475 aa18.42■□□□□ 0.54
TOP3B-217ENST00000489581 ARMCX5Q6P1M9 558 aa18.42■□□□□ 0.54
TOP3B-217ENST00000489581 CEP68Q76N32 757 aa18.42■□□□□ 0.54
TOP3B-217ENST00000489581 HAUS6Q7Z4H7 955 aa18.42■□□□□ 0.54
TOP3B-217ENST00000489581 LARSQ9P2J5 1176 aaKnown RBP18.42■□□□□ 0.54
TOP3B-217ENST00000489581 PRAMEF12O95522 483 aa18.41■□□□□ 0.54
TOP3B-217ENST00000489581 NCKAP1LP55160 1127 aa18.41■□□□□ 0.54
TOP3B-217ENST00000489581 CYP4F8P98187 520 aa18.41■□□□□ 0.54
TOP3B-217ENST00000489581 ARSHQ5FYA8 562 aa18.41■□□□□ 0.54
TOP3B-217ENST00000489581 JADE1Q6IE81 842 aa18.41■□□□□ 0.54
TOP3B-217ENST00000489581 ITIH5Q86UX2 942 aa18.41■□□□□ 0.54
TOP3B-217ENST00000489581 FAM160A2Q8N612 972 aaPredicted RBP18.41■□□□□ 0.54
TOP3B-217ENST00000489581 BPIFB1Q8TDL5 484 aa18.41■□□□□ 0.54
TOP3B-217ENST00000489581 CDK5RAP3Q96JB5 506 aa18.41■□□□□ 0.54
TOP3B-217ENST00000489581 SEPT5Q99719 369 aaPredicted RBP18.41■□□□□ 0.54
TOP3B-217ENST00000489581 LPIN3Q9BQK8 851 aa18.41■□□□□ 0.54
TOP3B-217ENST00000489581 SH2B1Q9NRF2 756 aaPredicted RBP18.41■□□□□ 0.54
TOP3B-217ENST00000489581 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.41■□□□□ 0.54
TOP3B-217ENST00000489581 TSC2P49815 1807 aa18.41■□□□□ 0.54
TOP3B-217ENST00000489581 VWA3AA6NCI4 1184 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 H0YCG3 227 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 HNRNPDLO14979 420 aaKnown RBP18.4■□□□□ 0.54
TOP3B-217ENST00000489581 OGTO15294 1046 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 FAM189A1O60320 539 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 EIF5BO60841 1220 aaKnown RBP18.4■□□□□ 0.54
TOP3B-217ENST00000489581 FGF19O95750 216 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 ODC1P11926 461 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 ATP2C1P98194 919 aaPredicted RBP18.4■□□□□ 0.54
TOP3B-217ENST00000489581 CCINQ13939 588 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 KYAT1Q16773 422 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 SLC39A12Q504Y0 691 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 SPATA1Q5VX52 437 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 MCTP1Q6DN14 999 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 OR10T2Q8NGX3 314 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 SMG9Q9H0W8 520 aaKnown RBP18.4■□□□□ 0.54
TOP3B-217ENST00000489581 TASP1Q9H6P5 420 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 OBP2AQ9NY56 170 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 KCND2Q9NZV8 630 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 TBX20Q9UMR3 447 aa18.4■□□□□ 0.54
TOP3B-217ENST00000489581 EML5Q05BV3 1969 aa18.39■□□□□ 0.53
TOP3B-217ENST00000489581 AXIN1O15169 862 aa18.39■□□□□ 0.53
TOP3B-217ENST00000489581 EXTL3O43909 919 aa18.39■□□□□ 0.53
TOP3B-217ENST00000489581 ADRB2P07550 413 aa18.39■□□□□ 0.53
TOP3B-217ENST00000489581 DHX8Q14562 1220 aaKnown RBP18.39■□□□□ 0.53
TOP3B-217ENST00000489581 MGAT5BQ3V5L5 792 aa18.39■□□□□ 0.53
TOP3B-217ENST00000489581 WDR5BQ86VZ2 330 aa18.39■□□□□ 0.53
TOP3B-217ENST00000489581 K7ENM7 598 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 NEFLP07196 543 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 NFICP08651 508 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 HOXA6P31267 233 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 PXNP49023 591 aaPredicted RBP18.38■□□□□ 0.53
TOP3B-217ENST00000489581 TUFMP49411 452 aaKnown RBP18.38■□□□□ 0.53
TOP3B-217ENST00000489581 PLCB2Q00722 1185 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 VEPH1Q14D04 833 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 CCDC6Q16204 474 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 TAF12Q16514 161 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 ST3GAL2Q16842 350 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 ITPRIPL2Q3MIP1 535 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 TMEM119Q4V9L6 283 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 C9orf57Q5W0N0 161 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 PKN3Q6P5Z2 889 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 SYNPOQ8N3V7 929 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 KCTD17Q8N5Z5 321 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 MYCT1Q8N699 235 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 GIPC2Q8TF65 315 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 CHAMP1Q96JM3 812 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 TSPAN18Q96SJ8 248 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 REEP2Q9BRK0 252 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 MSTO1Q9BUK6 570 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 SLC46A2Q9BY10 475 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 IL21Q9HBE4 155 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 GKN1Q9NS71 199 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 HSFX1Q9UBD0 423 aa18.38■□□□□ 0.53
TOP3B-217ENST00000489581 A0A0B4J269 797 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 PIRO00625 290 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 PIGRP01833 764 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 ATF6P18850 670 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 WEE1P30291 646 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 CDC25CP30307 473 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 SF3A2Q15428 464 aaKnown RBP18.37■□□□□ 0.53
TOP3B-217ENST00000489581 AASDHQ4L235 1098 aaPredicted RBP18.37■□□□□ 0.53
TOP3B-217ENST00000489581 RILPL1Q5EBL4 403 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 GPBP1Q86WP2 473 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 CD302Q8IX05 232 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 GCNAQ96QF7 691 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 ZCWPW1Q9H0M4 648 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 ARRDC1-AS1Q9H2J1 176 aa18.37■□□□□ 0.53
TOP3B-217ENST00000489581 THG1LQ9NWX6 298 aaKnown RBP18.37■□□□□ 0.53
TOP3B-217ENST00000489581 CPSF3Q9UKF6 684 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms