RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 APOA5Q6Q788 366 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 LRRC69Q6ZNQ3 347 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 GPR155Q7Z3F1 870 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 KRT25Q7Z3Z0 450 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 USP33Q8TEY7 942 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 TBC1D32Q96NH3 1257 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 ARID3AQ99856 593 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 SLKQ9H2G2 1235 aaPredicted RBP16.53■□□□□ 0.24
UFD1-209ENST00000489406 CCL26Q9Y258 94 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 USP20Q9Y2K6 914 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 KIAA1549LQ6ZVL6 1849 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 PTPRDP23468 1912 aa16.53■□□□□ 0.24
UFD1-209ENST00000489406 COL6A6A6NMZ7 2263 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 N4BP3O15049 544 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 CBFA2T3O75081 653 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 ALDH1A2O94788 518 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 HNRNPLP14866 589 aaKnown RBP eCLIP16.52■□□□□ 0.24
UFD1-209ENST00000489406 ARL2P36404 184 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 EIF2S3P41091 472 aaKnown RBP16.52■□□□□ 0.24
UFD1-209ENST00000489406 SOX4Q06945 474 aaPredicted RBP16.52■□□□□ 0.24
UFD1-209ENST00000489406 CRY1Q16526 586 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 TMEM92Q6UXU6 159 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 PDCD7Q8N8D1 485 aaKnown RBP16.52■□□□□ 0.24
UFD1-209ENST00000489406 ETNPPLQ8TBG4 499 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.24
UFD1-209ENST00000489406 SLC46A2Q9BY10 475 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 DNMT3LQ9UJW3 386 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 PCOLCE2Q9UKZ9 415 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 NUB1Q9Y5A7 615 aa16.52■□□□□ 0.24
UFD1-209ENST00000489406 COL12A1Q99715 3063 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 PODXLO00592 558 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 FGF19O95750 216 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 OR4Q2P0C623 313 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 MAP7D1Q3KQU3 841 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 TAF1BQ53T94 588 aaPredicted RBP16.51■□□□□ 0.23
UFD1-209ENST00000489406 CC2D1AQ6P1N0 951 aaPredicted RBP16.51■□□□□ 0.23
UFD1-209ENST00000489406 RABEPKQ7Z6M1 372 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 C4orf19Q8IY42 314 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 GALNT15Q8N3T1 639 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 WHAMMQ8TF30 809 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 SETD7Q8WTS6 366 aaKnown RBP16.51■□□□□ 0.23
UFD1-209ENST00000489406 PSMG2Q969U7 264 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 PNMA5Q96PV4 448 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 KIF2CQ99661 725 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 LXNQ9BS40 222 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 PRMT7Q9NVM4 692 aaPredicted RBP16.51■□□□□ 0.23
UFD1-209ENST00000489406 BCCIPQ9P287 314 aaKnown RBP eCLIP16.51■□□□□ 0.23
UFD1-209ENST00000489406 MMP17Q9ULZ9 603 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 SLC27A5Q9Y2P5 690 aa16.51■□□□□ 0.23
UFD1-209ENST00000489406 RBM8AQ9Y5S9 174 aaKnown RBP16.51■□□□□ 0.23
UFD1-209ENST00000489406 ATMQ13315 3056 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 LRRIQ4A6NIV6 560 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 GOLGA8CPA6NN73 597 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 ATXN1LP0C7T5 689 aaKnown RBP16.5■□□□□ 0.23
UFD1-209ENST00000489406 CDC27P30260 824 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 CMTM8Q8IZV2 173 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 BEST2Q8NFU1 509 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 TBCKQ8TEA7 893 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 PRIMPOLQ96LW4 560 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 TOR4AQ9NXH8 423 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 RGL1Q9NZL6 768 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 ASB3Q9Y575 518 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 MGAQ8IWI9 3026 aa16.5■□□□□ 0.23
UFD1-209ENST00000489406 MUC22E2RYF6 1773 aaPredicted RBP16.49■□□□□ 0.23
UFD1-209ENST00000489406 MYO9AB2RTY4 2548 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 SMIM28A0A1B0GU29 152 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 GOLGA8AA7E2F4 631 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 GOLGA8BA8MQT2 603 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 B8ZZF3 427 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 ZBTB43O43298 467 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 AP5Z1O43299 807 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 MARCH6O60337 910 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 SOAT2O75908 522 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 RPL6Q02878 288 aaKnown RBP16.49■□□□□ 0.23
UFD1-209ENST00000489406 BFSP1Q12934 665 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 EEF1DP3Q658K8 133 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 CPA6Q8N4T0 437 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 CCDC26Q8TAB7 109 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 RIN3Q8TB24 985 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 DDX12PQ92771 950 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 USP13Q92995 863 aaPredicted RBP16.49■□□□□ 0.23
UFD1-209ENST00000489406 ADPGKQ9BRR6 497 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 FZD8Q9H461 694 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 ECT2Q9H8V3 914 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 PRDM16Q9HAZ2 1276 aa16.49■□□□□ 0.23
UFD1-209ENST00000489406 CYP3A7-CYP3A51PA0A087WV96 503 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 K7EQS6 105 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 RRP8O43159 456 aaKnown RBP16.48■□□□□ 0.23
UFD1-209ENST00000489406 TLX3O43711 291 aaPredicted RBP16.48■□□□□ 0.23
UFD1-209ENST00000489406 CYP3A7P24462 503 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 ZNF33AQ06730 810 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 PPP2R5CQ13362 524 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 PRPF4BQ13523 1007 aaKnown RBP16.48■□□□□ 0.23
UFD1-209ENST00000489406 BYSLQ13895 437 aaKnown RBP16.48■□□□□ 0.23
UFD1-209ENST00000489406 CTTNQ14247 550 aaKnown RBP16.48■□□□□ 0.23
UFD1-209ENST00000489406 PDGFRLQ15198 375 aa16.48■□□□□ 0.23
UFD1-209ENST00000489406 PLEKHG6Q3KR16 790 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms