RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CENPCQ03188 943 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 MCL1Q07820 350 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 LAMC2Q13753 1193 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 CAPSQ13938 189 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 TTLL4Q14679 1199 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 SNX17Q15036 470 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 MAPK6Q16659 721 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 CYP1B1Q16678 543 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 CLEC16AQ2KHT3 1053 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 CFAP58Q5T655 872 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 SEL1L2Q5TEA6 688 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 EMC10Q5UCC4 262 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 C1orf53Q5VUE5 145 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 LRIG3Q6UXM1 1119 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 SND1Q7KZF4 910 aaKnown RBP eCLIP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ZNF771Q7L3S4 317 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 EEPD1Q7L9B9 569 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 CROCCP2Q86T23 111 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ARRDC4Q8NCT1 418 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 FAM174AQ8TBP5 190 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ADAM32Q8TC27 787 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ASAP3Q8TDY4 903 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 DIS3LQ8TF46 1054 aaKnown RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 HDAC7Q8WUI4 952 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 SLC20A1Q8WUM9 679 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 SLCO2A1Q92959 643 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 CD101Q93033 1021 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 KRT12Q99456 494 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ZSWIM1Q9BR11 485 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 SH2D3AQ9BRG2 576 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 MSTO1Q9BUK6 570 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ZNF518BQ9C0D4 1074 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 MRPL47Q9HD33 250 aaKnown RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 OSGEPQ9NPF4 335 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 HOMER3Q9NSC5 361 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 PCYOX1Q9UHG3 505 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ZHX1Q9UKY1 873 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 PACSIN2Q9UNF0 486 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 PHF24Q9UPV7 400 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.02□□□□□ -0.97
VTI1A-207ENST00000489357 PCDHA3Q9Y5H8 950 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 ALG6Q9Y672 507 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 SCINQ9Y6U3 715 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 DNAH12Q6ZR08 3092 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 KAT6AQ92794 2004 aa9.02□□□□□ -0.97
VTI1A-207ENST00000489357 MYADML2A6NDP7 307 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 POLR3GO15318 223 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 RAD51CO43502 376 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 GDF9O60383 454 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 B4GALT4O60513 344 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 IL18RAPO95256 599 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 SYF2O95926 243 aaKnown RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 PGK1P00558 417 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 HLA-DRAP01903 254 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 CYP1A1P04798 512 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 MYBL2P10244 700 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 PROZP22891 400 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 USP8P40818 1118 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 FNTAP49354 379 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 RWDD2BP57060 319 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 CDC42EP1Q00587 391 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 SP4Q02446 784 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 TAP1Q03518 808 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 ARHGAP1Q07960 439 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 VAC14Q08AM6 782 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 CUL2Q13617 745 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 FAM187BQ17R55 369 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 ZNF484Q5JVG2 852 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 LIN9Q5TKA1 542 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 TDRD10Q5VZ19 366 aaKnown RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 CRELD2Q6UXH1 353 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 TSHZ1Q6ZSZ6 1077 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 SYDE1Q6ZW31 735 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 SLC47A2Q86VL8 602 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 PHF13Q86YI8 300 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 IQCKQ8N0W5 287 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 TTC39CQ8N584 583 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 C12orf50Q8NA57 414 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 SLC43A3Q8NBI5 491 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 ZNF564Q8TBZ8 553 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 GLG1Q92896 1179 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 TMEM143Q96AN5 459 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 LENG1Q96BZ8 264 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 ZNF653Q96CK0 615 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 ARHGEF26Q96DR7 871 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 PAWRQ96IZ0 340 aaKnown RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 C1QTNF2Q9BXJ5 285 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 TSPYL1Q9H0U9 437 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 SUGCTQ9HAC7 445 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 XPNPEP3Q9NQH7 507 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 ERAP1Q9NZ08 941 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 VPS18Q9P253 973 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 FEZ2Q9UHY8 353 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-207ENST00000489357 COG5Q9UP83 839 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 CNTNAP2Q9UHC6 1331 aa9.01□□□□□ -0.97
VTI1A-207ENST00000489357 ACKR2O00590 384 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 FAM189A1O60320 539 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 PHF2O75151 1096 aa9□□□□□ -0.97
VTI1A-207ENST00000489357 ASS1P00966 412 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms