RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 GRAP2O75791 330 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 ITGBL1O95965 494 aaPredicted RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 MAPK4P31152 587 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 DSG3P32926 999 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 TAS2R40P59535 323 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 MRPS35P82673 323 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 GTF2BQ00403 316 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 ITIH3Q06033 890 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 CETN1Q12798 172 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 Q3C1V9 767 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 RHPN2Q8IUC4 686 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 ANKRD42Q8N9B4 389 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 SLC17A8Q8NDX2 589 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 GDAP1Q8TB36 358 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 UCMAQ8WVF2 138 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 FMO2Q99518 471 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 LPIN3Q9BQK8 851 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 SYT11Q9BT88 431 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 ISCUQ9H1K1 167 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 TXNRD2Q9NNW7 524 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 ADAM22Q9P0K1 906 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 SUCLA2Q9P2R7 463 aaPredicted RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 ASIC3Q9UHC3 531 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 TMEM59LQ9UK28 342 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 SLC12A4Q9UP95 1085 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 NUB1Q9Y5A7 615 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 RPTORQ8N122 1335 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 C5orf60A6NFR6 353 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 K7ERI5 159 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 IGF2BP3O00425 579 aaKnown RBP eCLIP8.08□□□□□ -1.12
BEST3-205ENST00000488961 GGPS1O95749 300 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 VIMP08670 466 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 KRT16P08779 473 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 MYZAPP0CAP1 466 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 CYP2C8P10632 490 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 MAPTP10636 758 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 GLRA2P23416 452 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 PLOD1Q02809 727 aaPredicted RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 GAD2Q05329 585 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 CYP4F22Q6NT55 531 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 TMC3Q7Z5M5 1100 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 SCYL3Q8IZE3 742 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 EMC1Q8N766 993 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 SNRNP27Q8WVK2 155 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 PRPF31Q8WWY3 499 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 PBKQ96KB5 322 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 C9orf72Q96LT7 481 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 TMEM206Q9H813 350 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 TBC1D22BQ9NU19 505 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 NKX1-2Q9UD57 310 aaPredicted RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 GTF3C4Q9UKN8 822 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 AGO2Q9UKV8 859 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 POLIQ9UNA4 740 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 VNN1O95497 513 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 IFNB1P01574 187 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 DRD4P21917 467 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 MYBPC2Q14324 1141 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 KIF22Q14807 665 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 EAPPQ56P03 285 aaPredicted RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 DEPTORQ8TB45 409 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 ACTRT1Q8TDG2 376 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 NSUN6Q8TEA1 469 aaKnown RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 ZBED3Q96IU2 234 aaPredicted RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 LBHD1Q9BQE6 289 aaPredicted RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 ZSWIM1Q9BR11 485 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 PPP1R12CQ9BZL4 782 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 ZNF302Q9NR11 478 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 RBAKQ9NYW8 714 aaPredicted RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 SLC12A6Q9UHW9 1150 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 TSKSQ9UJT2 592 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 NENFQ9UMX5 172 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 DOCK3Q8IZD9 2030 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 HMGB1P1B2RPK0 211 aaPredicted RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 INO80B-WBP1J3KQ70 363 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 STBD1O95210 358 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 RALAP11233 206 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 CD19P15391 556 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 UBA1P22314 1058 aaKnown RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 TCF7P36402 384 aaPredicted RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 MFAP3P55082 362 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 MYL6P60660 151 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 LBRQ14739 615 aaKnown RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 AMHR2Q16671 573 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 KYNUQ16719 465 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 EMC10Q5UCC4 262 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 OR52E8Q6IFG1 317 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 CEP128Q6ZU80 1094 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 SLFN11Q7Z7L1 901 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 FAM71AQ8IYT1 594 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 GPD1LQ8N335 351 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 RNF149Q8NC42 400 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 CCDC197Q8NCU1 140 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 CAVIN3Q969G5 261 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 CPB2Q96IY4 423 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 IFT74Q96LB3 600 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 AGAP3Q96P47 875 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 INO80BQ9C086 356 aaPredicted RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 C12orf65Q9H3J6 166 aaKnown RBP8.07□□□□□ -1.12
BEST3-205ENST00000488961 C1orf112Q9NSG2 853 aa8.07□□□□□ -1.12
BEST3-205ENST00000488961 ABCF3Q9NUQ8 709 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms