RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 SV2CQ496J9 727 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 CLLU1OSQ5K130 101 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 PASD1Q8IV76 773 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 KIF18AQ8NI77 898 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 ZNF606Q8WXB4 792 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 TFAP2BQ92481 460 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 SEPT8Q92599 483 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 RABGGTAQ92696 567 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 MRPL45Q9BRJ2 306 aaKnown RBP11.64□□□□□ -0.55
COL21A1-211ENST00000488912 PAAF1Q9BRP4 392 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 TMEM106CQ9BVX2 250 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 ELOVL4Q9GZR5 314 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 ISCUQ9H1K1 167 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 MYO1AQ9UBC5 1043 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 INTUQ9ULD6 942 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 BARX2Q9UMQ3 279 aaPredicted RBP11.64□□□□□ -0.55
COL21A1-211ENST00000488912 BUB1O43683 1085 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 MOCS3O95396 460 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 FTLP02792 175 aaPredicted RBP11.64□□□□□ -0.55
COL21A1-211ENST00000488912 CLTBP09497 229 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 FGFR1P11362 822 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 GZMAP12544 262 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 NDST1P52848 882 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 GRIK3Q13003 919 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 CLEC16AQ2KHT3 1053 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 SLC4A11Q8NBS3 891 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 APBB2Q92870 758 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 THAP2Q9H0W7 228 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 TMEM39AQ9NV64 488 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 GDAP2Q9NXN4 497 aa11.64□□□□□ -0.55
COL21A1-211ENST00000488912 ANKRD62A6NC57 917 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 PODXLO00592 558 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 ENPP3O14638 875 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 INPPL1O15357 1258 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 RTN2O75298 545 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 CXCL10P02778 98 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 CYP1A1P04798 512 aaPredicted RBP11.63□□□□□ -0.55
COL21A1-211ENST00000488912 TMEM253P0C7T8 217 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 UNGP13051 313 aaPredicted RBP11.63□□□□□ -0.55
COL21A1-211ENST00000488912 SMYD5Q6GMV2 418 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 GLB1LQ6UWU2 654 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 DEFB128Q7Z7B8 93 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 C3orf58Q8NDZ4 430 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 CTNNBL1Q8WYA6 563 aaPredicted RBP11.63□□□□□ -0.55
COL21A1-211ENST00000488912 CYFIP2Q96F07 1278 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 TMEM176AQ96HP8 235 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 MCOLN1Q9GZU1 580 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 FAM124BQ9H5Z6 455 aaPredicted RBP11.63□□□□□ -0.55
COL21A1-211ENST00000488912 NME7Q9Y5B8 376 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 BTNL10A8MVZ5 291 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 PAEPP09466 180 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 CD19P15391 556 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 CASQ1P31415 396 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 UPP1Q16831 310 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 NAA35Q5VZE5 725 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 NECAB2Q7Z6G3 386 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 TTC39CQ8N584 583 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 KBTBD7Q8WVZ9 684 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 CPA5Q8WXQ8 436 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 ARHGEF26Q96DR7 871 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 TSPYL1Q9H0U9 437 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 TMEM161AQ9NX61 479 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 L1RE1Q9UN81 338 aa11.63□□□□□ -0.55
COL21A1-211ENST00000488912 TSC2P49815 1807 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 HCRTO43612 131 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 PARNO95453 639 aaKnown RBP11.62□□□□□ -0.55
COL21A1-211ENST00000488912 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
COL21A1-211ENST00000488912 NOMO3P69849 1222 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 CENPCQ03188 943 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 TUSC3Q13454 348 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 ACAD10Q6JQN1 1059 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 TRIM72Q6ZMU5 477 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 LIMS2Q7Z4I7 341 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 RNF10Q8N5U6 811 aaKnown RBP11.62□□□□□ -0.55
COL21A1-211ENST00000488912 APPL2Q8NEU8 664 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 NOX5Q96PH1 765 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 NT5C1AQ9BXI3 368 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.62□□□□□ -0.55
COL21A1-211ENST00000488912 NCANO14594 1321 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 FNDC1Q4ZHG4 1894 aaPredicted RBP11.62□□□□□ -0.55
COL21A1-211ENST00000488912 ALPK3Q96L96 1907 aa11.62□□□□□ -0.55
COL21A1-211ENST00000488912 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.61□□□□□ -0.55
COL21A1-211ENST00000488912 ATMINO43313 823 aaPredicted RBP11.61□□□□□ -0.55
COL21A1-211ENST00000488912 B4GALT3O60512 393 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 RPL9P32969 192 aaKnown RBP11.61□□□□□ -0.55
COL21A1-211ENST00000488912 TRIM58Q8NG06 486 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 OR6B3Q8NGW1 331 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 RFFLQ8WZ73 363 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 VWCEQ96DN2 955 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 OSGEPQ9NPF4 335 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 PCDH10Q9P2E7 1040 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 PCDHGC3Q9UN70 934 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 LTBP2Q14767 1821 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 A0A0A6YYK5 440 aaPredicted RBP11.61□□□□□ -0.55
COL21A1-211ENST00000488912 CYB561D2O14569 222 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 HUS1O60921 280 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 TACC1O75410 805 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 ITGB8P26012 769 aa11.61□□□□□ -0.55
COL21A1-211ENST00000488912 NSFP46459 744 aaKnown RBP11.61□□□□□ -0.55
COL21A1-211ENST00000488912 PAN2Q504Q3 1202 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms