RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CYLC1P35663 651 aaPredicted RBP20.75■□□□□ 0.91
CCM2-216ENST00000488727 KLK7P49862 253 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 LILRA4P59901 499 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 KRT83P78385 493 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 GRIN2CQ14957 1233 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 ZNF569Q5MCW4 686 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 DDX53Q86TM3 631 aaKnown RBP20.75■□□□□ 0.91
CCM2-216ENST00000488727 FAM161BQ96MY7 647 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 EDEM3Q9BZQ6 932 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 HAUS4Q9H6D7 363 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 TMEM8AQ9HCN3 771 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 NUB1Q9Y5A7 615 aa20.75■□□□□ 0.91
CCM2-216ENST00000488727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.75■□□□□ 0.91
CCM2-216ENST00000488727 AARSP49588 968 aaKnown RBP eCLIP20.74■□□□□ 0.91
CCM2-216ENST00000488727 RBP5P82980 135 aa20.74■□□□□ 0.91
CCM2-216ENST00000488727 KRT17Q04695 432 aa20.74■□□□□ 0.91
CCM2-216ENST00000488727 CAMK1Q14012 370 aa20.74■□□□□ 0.91
CCM2-216ENST00000488727 TIGD5Q53EQ6 642 aa20.74■□□□□ 0.91
CCM2-216ENST00000488727 KRT39Q6A163 491 aa20.74■□□□□ 0.91
CCM2-216ENST00000488727 TAS1R1Q7RTX1 841 aa20.74■□□□□ 0.91
CCM2-216ENST00000488727 TAS1R2Q8TE23 839 aa20.74■□□□□ 0.91
CCM2-216ENST00000488727 PRDM12Q9H4Q4 367 aa20.74■□□□□ 0.91
CCM2-216ENST00000488727 EIF3CLB5ME19 914 aaKnown RBP20.73■□□□□ 0.91
CCM2-216ENST00000488727 PHACTR2O75167 634 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 LRRN2O75325 713 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 SF3B1O75533 1304 aaKnown RBP eCLIP20.73■□□□□ 0.912e-7■■■■■ 82.1
CCM2-216ENST00000488727 TSC2P49815 1807 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 TAF6P49848 677 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 MXI1P50539 228 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 MYL6P60660 151 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 KCNH2Q12809 1159 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 GPR153Q6NV75 609 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 RSRC2Q7L4I2 434 aaKnown RBP20.73■□□□□ 0.91
CCM2-216ENST00000488727 SLC35F6Q8N357 371 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 LRRC52Q8N7C0 313 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 POF1BQ8WVV4 589 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 ELMO3Q96BJ8 720 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 B3GALT6Q96L58 329 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 PCMTD1Q96MG8 357 aaPredicted RBP20.73■□□□□ 0.91
CCM2-216ENST00000488727 EIF3CQ99613 913 aaKnown RBP20.73■□□□□ 0.91
CCM2-216ENST00000488727 CDC23Q9UJX2 597 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 LZTS1Q9Y250 596 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 CTAGE9A4FU28 777 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 FMO5P49326 533 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 NCOA4Q13772 614 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 Q7L0L9 218 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 VPS52Q8N1B4 723 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 ZNF560Q96MR9 790 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 NAPGQ99747 312 aaPredicted RBP20.73■□□□□ 0.91
CCM2-216ENST00000488727 XYLT2Q9H1B5 865 aa20.73■□□□□ 0.91
CCM2-216ENST00000488727 CSPG5O95196 566 aa20.72■□□□□ 0.91
CCM2-216ENST00000488727 HLA-DRAP01903 254 aa20.72■□□□□ 0.91
CCM2-216ENST00000488727 PNPLA4P41247 253 aa20.72■□□□□ 0.91
CCM2-216ENST00000488727 UBE3AQ05086 875 aa20.72■□□□□ 0.91
CCM2-216ENST00000488727 TRPC3Q13507 836 aa20.72■□□□□ 0.91
CCM2-216ENST00000488727 SEMA4DQ92854 862 aa20.72■□□□□ 0.91
CCM2-216ENST00000488727 HPDLQ96IR7 371 aa20.72■□□□□ 0.91
CCM2-216ENST00000488727 SUSD3Q96L08 255 aa20.72■□□□□ 0.91
CCM2-216ENST00000488727 MYO7AQ13402 2215 aa20.71■□□□□ 0.91
CCM2-216ENST00000488727 KPNA7A9QM74 516 aa20.71■□□□□ 0.91
CCM2-216ENST00000488727 AFPP02771 609 aaKnown RBP20.71■□□□□ 0.91
CCM2-216ENST00000488727 SOD2P04179 222 aa20.71■□□□□ 0.91
CCM2-216ENST00000488727 PIK3CAP42336 1068 aa20.71■□□□□ 0.91
CCM2-216ENST00000488727 ERVFC1P60507 584 aa20.71■□□□□ 0.91
CCM2-216ENST00000488727 FAM171A1Q5VUB5 890 aa20.71■□□□□ 0.91
CCM2-216ENST00000488727 ZBP1Q9H171 429 aa20.71■□□□□ 0.91
CCM2-216ENST00000488727 NHEJ1Q9H9Q4 299 aaPredicted RBP20.71■□□□□ 0.91
CCM2-216ENST00000488727 PUF60Q9UHX1 559 aaKnown RBP20.71■□□□□ 0.91
CCM2-216ENST00000488727 COQ4Q9Y3A0 265 aa20.71■□□□□ 0.91
CCM2-216ENST00000488727 M0QZQ0 153 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 TKTP29401 623 aaKnown RBP20.7■□□□□ 0.9
CCM2-216ENST00000488727 MYL7Q01449 175 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 SV2CQ496J9 727 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 RTP2Q5QGT7 225 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 CEP112Q8N8E3 955 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 FBXL13Q8NEE6 735 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 SENP8Q96LD8 212 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 PI4K2AQ9BTU6 479 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 HERC2P3Q9BVR0 1158 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 TLR9Q9NR96 1032 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 CHST7Q9NS84 486 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 OGFRQ9NZT2 677 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 PCDHGC5Q9Y5F6 944 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 TRAPPC3O43617 180 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 FGFR3P22607 806 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 IRS1P35568 1242 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 ELAVL2Q12926 359 aaKnown RBP20.7■□□□□ 0.9
CCM2-216ENST00000488727 MYO1EQ12965 1108 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 GLIPR1L2Q4G1C9 344 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 GPR161Q8N6U8 529 aaKnown RBP20.7■□□□□ 0.9
CCM2-216ENST00000488727 EHBP1Q8NDI1 1231 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 AUTS2Q8WXX7 1259 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 GOLGA1Q92805 767 aa20.7■□□□□ 0.9
CCM2-216ENST00000488727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.7■□□□□ 0.91e-6■■■■■ 98.5
CCM2-216ENST00000488727 ARGLU1Q9NWB6 273 aaPredicted RBP20.7■□□□□ 0.9
CCM2-216ENST00000488727 PMM2O15305 246 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 STAU1O95793 577 aaKnown RBP20.69■□□□□ 0.9
CCM2-216ENST00000488727 ABL1P00519 1130 aa20.69■□□□□ 0.9
CCM2-216ENST00000488727 ASS1P00966 412 aaKnown RBP20.69■□□□□ 0.9
CCM2-216ENST00000488727 ATICP31939 592 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms