RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PRKCEQ02156 737 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 NOLC1Q14978 699 aaKnown RBP eCLIP3□□□□□ -1.93
DEPDC1-203ENST00000488146 RSPO4Q2I0M5 234 aaPredicted RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 TMEM63BQ5T3F8 832 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 LIN9Q5TKA1 542 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 VPS53Q5VIR6 699 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 PLPP4Q5VZY2 271 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 EGFLAMQ63HQ2 1017 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 TXNDC11Q6PKC3 985 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC36A4Q6YBV0 504 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 TRMT11Q7Z4G4 463 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 HAUS6Q7Z4H7 955 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 MFSD6LQ8IWD5 586 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 VPS52Q8N1B4 723 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 SRBD1Q8N5C6 995 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 PHC3Q8NDX5 983 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 APPL2Q8NEU8 664 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 OLIG1Q8TAK6 271 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 GRAMD1AQ96CP6 724 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 TRMT2BQ96GJ1 504 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 FAM227BQ96M60 508 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 PNMA5Q96PV4 448 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 FAM193BQ96PV7 902 aaPredicted RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF577Q9BSK1 485 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 PHF20Q9BVI0 1012 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 APOL6Q9BWW8 343 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 LSM14BQ9BX40 385 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 TRIM55Q9BYV6 548 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 GSX2Q9BZM3 304 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 B3GNT4Q9C0J1 378 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 LACRTQ9GZZ8 138 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 LSG1Q9H089 658 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 CCDC113Q9H0I3 377 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 MUC3BQ9H195 1237 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 TNKS2Q9H2K2 1166 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 FZD8Q9H461 694 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 FAM86C1Q9NVL1 165 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 NCDNQ9UBB6 729 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 FBXL21Q9UKT6 434 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 TBX20Q9UMR3 447 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 PCDHA4Q9UN74 947 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC12A7Q9Y666 1083 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 A0A1B0GUA9 196 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 WDR27A2RRH5 827 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 M0QZQ0 153 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 SMAD7O15105 426 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 PRC1O43663 620 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 BNIP3LO60238 219 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 DFNA5O60443 496 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 DEXIO95424 95 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 BAG4O95429 457 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 CYP21A2P08686 494 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 PTPN2P17706 415 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 XBP1P17861 261 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 CDC25CP30307 473 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 LIG3P49916 1009 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 SNRPFP62306 86 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 ADCY1Q08828 1119 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 DMWDQ09019 674 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 FZD5Q13467 585 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 CAMK2GQ13555 558 aaPredicted RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 PPP2R5EQ16537 467 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC44A4Q53GD3 710 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 SNAP47Q5SQN1 464 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 RARS2Q5T160 578 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 UTP14CQ5TAP6 766 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 KRT40Q6A162 431 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 WWC2Q6AWC2 1192 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 EFCAB12Q6NXP0 572 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 FUT10Q6P4F1 479 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 CPLX2Q6PUV4 134 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 APOA5Q6Q788 366 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 PRR23CQ6ZRP0 262 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 FERMT3Q86UX7 667 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 RASSF3Q86WH2 238 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 RELL1Q8IUW5 271 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 CCDC60Q8IWA6 550 aaPredicted RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 PGBD3Q8N328 593 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 ELMOD1Q8N336 334 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 ENGASEQ8NFI3 743 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 ATRIPQ8WXE1 791 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 SMG7Q92540 1137 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 KIFAP3Q92845 792 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 OTUB2Q96DC9 234 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 SEC62Q99442 399 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 P2RY13Q9BPV8 354 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 VN1R3Q9BXE9 311 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 UBA5Q9GZZ9 404 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 RASSF4Q9H2L5 321 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 NXF3Q9H4D5 531 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 ST6GALNAC4Q9H4F1 302 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 MAN1C1Q9NR34 630 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 DISC1Q9NRI5 854 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 SNTG2Q9NY99 539 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 UXTQ9UBK9 157 aaPredicted RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 PFDN2Q9UHV9 154 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 ADAM28Q9UKQ2 775 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 VAV3Q9UKW4 847 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 PCDHB2Q9Y5E7 798 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms