RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 CDCA5Q96FF9 252 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SMC6Q96SB8 1091 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 CCT8L2Q96SF2 557 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 GPR20Q99678 358 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 GCOM2Q9BZD3 368 aaPredicted RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 IQCGQ9H095 443 aaKnown RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 FAM124BQ9H5Z6 455 aaPredicted RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 ZNF408Q9H9D4 720 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SAYSD1Q9NPB0 183 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 PDLIM7Q9NR12 457 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 CISHQ9NSE2 258 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 CHORDC1Q9UHD1 332 aaPredicted RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 GGA2Q9UJY4 613 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 ITGA11Q9UKX5 1188 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 FZD1Q9UP38 647 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 TNFSF13BQ9Y275 285 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 CAPN7Q9Y6W3 813 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 COL4A5P29400 1685 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SPTBN5Q9NRC6 3674 aaKnown RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 RRN3P2A6NIE6 340 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SPDYE5A6NIY4 337 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 A6NJR5 290 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 LGR5O75473 907 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SUN1O94901 812 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 PGK2P07205 417 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 VDRP11473 427 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 UNGP13051 313 aaPredicted RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 CHN1P15882 459 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 ALDH3A1P30838 453 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SSTR3P32745 418 aaPredicted RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SLCO1A2P46721 670 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 GCLCP48506 637 aaPredicted RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 PEX5P50542 639 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 ARSEP51690 589 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 GTF2A2P52657 109 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 CLDN10P78369 228 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 POU5F1Q01860 360 aaKnown RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SLC29A2Q14542 456 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 KLHL38Q2WGJ6 581 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 ZNF394Q53GI3 561 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 TFDP3Q5H9I0 405 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 CDCA2Q69YH5 1023 aaPredicted RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 DARS2Q6PI48 645 aaKnown RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 TSHZ1Q6ZSZ6 1077 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 PALB2Q86YC2 1186 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 OR6J1Q8NGC5 347 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 FBXO25Q8TCJ0 367 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 ZNF606Q8WXB4 792 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SEC14L1Q92503 715 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 HSPH1Q92598 858 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SLCO2A1Q92959 643 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 ZBTB45Q96K62 511 aaPredicted RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 PARK7Q99497 189 aaKnown RBP2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SNX25Q9H3E2 840 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 ASB7Q9H672 318 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 ERVK-5Q9HDB9 667 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SENP1Q9P0U3 644 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 BTBD7Q9P203 1132 aa2.8□□□□□ -1.96
C9orf72-205ENST00000488117 SSC5DA1L4H1 1573 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 BRCA2P51587 3418 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ZNF646O15015 1829 aaPredicted RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 IGKV6D-21A0A0A0MT36 114 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SOWAHBA6NEL2 793 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 H7C0C1 242 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 MEFVO15553 781 aaPredicted RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 VNN1O95497 513 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ASS1P00966 412 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 IFNB1P01574 187 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 STAG3L1P0CL83 205 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ATP5OP48047 213 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 MARCKSL1P49006 195 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 LIG3P49916 1009 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SARNPP82979 210 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ROR1Q01973 937 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 GPS1Q13098 491 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 IFT88Q13099 833 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ACAP1Q15027 740 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 WDR72Q3MJ13 1102 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 SEZ6Q53EL9 994 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 PLEKHA7Q6IQ23 1121 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 AADACL2Q6P093 401 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 C4orf22Q6V702 233 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 C15orf39Q6ZRI6 1047 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 PNMA8AQ86V59 439 aaPredicted RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ZNF410Q86VK4 478 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 CNPY4Q8N129 248 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 MYCBPAPQ8TBZ2 947 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 MGARPQ8TDB4 240 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ZC3H15Q8WU90 426 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 PIK3R5Q8WYR1 880 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 DDX1Q92499 740 aaKnown RBP2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ZNF516Q92618 1163 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 CD101Q93033 1021 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 KIF12Q96FN5 646 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 TMEM176AQ96HP8 235 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 ZNF560Q96MR9 790 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 TMEM109Q9BVC6 243 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 NEUROG2Q9H2A3 272 aa2.79□□□□□ -1.96
C9orf72-205ENST00000488117 CDC42EP4Q9H3Q1 356 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms