RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 KRT39Q6A163 491 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 ZNF280DQ6N043 979 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 ANKRD54Q6NXT1 300 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 ADGRF2Q8IZF7 708 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 PPP2R3CQ969Q6 453 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 CDCA3Q99618 268 aaPredicted RBP18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 FANCLQ9NW38 375 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 SSX2IPQ9Y2D8 614 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 NFE2L3Q9Y4A8 694 aa18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.4■□□□□ 0.54
SHROOM1-205ENST00000488072 TSC2P49815 1807 aa18.39■□□□□ 0.54
SHROOM1-205ENST00000488072 H7C4K7 107 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 HUS1O60921 280 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 SOAT2O75908 522 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 ASS1P00966 412 aaKnown RBP18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 PSMC1P62191 440 aaKnown RBP18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 KCNH2Q12809 1159 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 SLC8B1Q6J4K2 584 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 TMC5Q6UXY8 1006 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 TMEM184AQ6ZMB5 413 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 AOPEPQ8N6M6 819 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 KREMEN2Q8NCW0 462 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 ENOX1Q8TC92 643 aaKnown RBP18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 ARID3AQ99856 593 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 RHOBTB2Q9BYZ6 727 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 S1PR5Q9H228 398 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 HSD3B7Q9H2F3 369 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 DPEP3Q9H4B8 488 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 METTL14Q9HCE5 456 aaKnown RBP18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 DDX43Q9NXZ2 648 aaKnown RBP18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 STK39Q9UEW8 545 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 HMGXB4Q9UGU5 601 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 DACH1Q9UI36 760 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 SLC27A5Q9Y2P5 690 aa18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 R3HCC1Q9Y3T6 440 aaKnown RBP18.39■□□□□ 0.53
SHROOM1-205ENST00000488072 PRUNE2Q8WUY3 3088 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 CPB1P15086 417 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 GTF2H1P32780 548 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 ASPAP45381 313 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 MARSP56192 900 aaKnown RBP18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 ZNF667Q5HYK9 610 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 METTL23Q86XA0 190 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 GPR65Q8IYL9 337 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 TOP6BLQ8N6T0 577 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 ATAD1Q8NBU5 361 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 KAT5Q92993 513 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 SYAP1Q96A49 352 aaPredicted RBP18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 ZCWPW1Q9H0M4 648 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 RAB20Q9NX57 234 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 FBXW11Q9UKB1 542 aa18.38■□□□□ 0.53
SHROOM1-205ENST00000488072 MYBPHLA2RUH7 354 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 GABRDO14764 452 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 ABLIM3O94929 683 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 STAU1O95793 577 aaKnown RBP18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 IL9P15248 144 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 ATICP31939 592 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 MTIF2P46199 727 aaKnown RBP18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 TNNC1P63316 161 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 NOP14P78316 857 aaKnown RBP18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 MYL7Q01449 175 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 ENPEPQ07075 957 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 SGSM1Q2NKQ1 1148 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 SLC39A12Q504Y0 691 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 DHX40Q8IX18 779 aaKnown RBP18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 STKLD1Q8NE28 680 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 FBXL13Q8NEE6 735 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 LMO3Q8TAP4 145 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 TWNKQ96RR1 684 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 CRACR2AQ9BSW2 395 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 THAP9Q9H5L6 903 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 VRTNQ9H8Y1 702 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 CRTAC1Q9NQ79 661 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 TAB2Q9NYJ8 693 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 THEGQ9P2T0 379 aa18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.37■□□□□ 0.53
SHROOM1-205ENST00000488072 MTMR11A4FU01 709 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 KCNJ18B7U540 433 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 NRG2O14511 850 aaPredicted RBP18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 GNA14O95837 355 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 AFPP02771 609 aaKnown RBP18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 CCDC192P0DO97 292 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 WARSP23381 471 aaKnown RBP18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 NTHL1P78549 312 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 ADCY1Q08828 1119 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 DUSP4Q13115 394 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 KCNJ12Q14500 433 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 MIIPQ5JXC2 388 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 PDXDC1Q6P996 788 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 GJB7Q6PEY0 223 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 ARHGEF19Q8IW93 802 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 OR6B3Q8NGW1 331 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 SLC7A14Q8TBB6 771 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 CASP10Q92851 521 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 ZNF707Q96C28 371 aaPredicted RBP18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 PKMYT1Q99640 499 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 CYP4F11Q9HBI6 524 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 CD207Q9UJ71 328 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 GTF3C4Q9UKN8 822 aa18.36■□□□□ 0.53
SHROOM1-205ENST00000488072 DSEQ9UL01 958 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms