RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 WSCD1Q658N2 575 aa15.71■□□□□ 0.11
LIMS3-205ENST00000487150 GLYCTKQ8IVS8 523 aa15.71■□□□□ 0.11
LIMS3-205ENST00000487150 DCP1BQ8IZD4 617 aaKnown RBP15.71■□□□□ 0.11
LIMS3-205ENST00000487150 PDCL2Q8N4E4 241 aa15.71■□□□□ 0.11
LIMS3-205ENST00000487150 BORCS6Q96GS4 357 aa15.71■□□□□ 0.11
LIMS3-205ENST00000487150 MMS19Q96T76 1030 aa15.71■□□□□ 0.11
LIMS3-205ENST00000487150 GZF1Q9H116 711 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-205ENST00000487150 ANO10Q9NW15 660 aa15.71■□□□□ 0.11
LIMS3-205ENST00000487150 USP15Q9Y4E8 981 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-205ENST00000487150 TIMM13Q9Y5L4 95 aaPredicted RBP15.71■□□□□ 0.11
LIMS3-205ENST00000487150 MBTPS2O43462 519 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 TACC1O75410 805 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 ZMYND10O75800 440 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 ABLIM3O94929 683 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 PAPLNO95428 1278 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 C8AP07357 584 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 TRIM49P0CI25 452 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 TRIM49CP0CI26 452 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 MARSP56192 900 aaKnown RBP15.7■□□□□ 0.1
LIMS3-205ENST00000487150 ARPP19P56211 112 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 DLG4P78352 724 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 GPR17Q13304 367 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 CBX2Q14781 532 aaPredicted RBP15.7■□□□□ 0.1
LIMS3-205ENST00000487150 NFE2Q16621 373 aaPredicted RBP15.7■□□□□ 0.1
LIMS3-205ENST00000487150 STX1AQ16623 288 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 DPCR1Q3MIW9 517 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 WDR72Q3MJ13 1102 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 SYCE2Q6PIF2 218 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 PLEKHO2Q8TD55 490 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 ZNF516Q92618 1163 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 ACBD6Q9BR61 282 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 FAM124BQ9H5Z6 455 aaPredicted RBP15.7■□□□□ 0.1
LIMS3-205ENST00000487150 L1RE1Q9UN81 338 aa15.7■□□□□ 0.1
LIMS3-205ENST00000487150 WDR27A2RRH5 827 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 P4HA2O15460 535 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 LETM1O95202 739 aaPredicted RBP15.69■□□□□ 0.1
LIMS3-205ENST00000487150 WARSP23381 471 aaKnown RBP15.69■□□□□ 0.1
LIMS3-205ENST00000487150 GCLMP48507 274 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 MYL6P60660 151 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 CLUL1Q15846 466 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 KLHL40Q2TBA0 621 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 SKOR2Q2VWA4 1001 aaPredicted RBP15.69■□□□□ 0.1
LIMS3-205ENST00000487150 WDR44Q5JSH3 913 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 RARS2Q5T160 578 aaKnown RBP15.69■□□□□ 0.1
LIMS3-205ENST00000487150 GPR149Q86SP6 731 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 TCEAL8Q8IYN2 117 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 ELMOD1Q8N336 334 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 TTC39CQ8N584 583 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 FBXL13Q8NEE6 735 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.69■□□□□ 0.1
LIMS3-205ENST00000487150 SLC7A14Q8TBB6 771 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 SUSD6Q92537 303 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 EEF2KMTQ96G04 330 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 DUSP9Q99956 384 aaKnown RBP15.69■□□□□ 0.1
LIMS3-205ENST00000487150 ZCWPW1Q9H0M4 648 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 XYLT2Q9H1B5 865 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 S1PR5Q9H228 398 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 SNX25Q9H3E2 840 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 PIDD1Q9HB75 910 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 DDX43Q9NXZ2 648 aaKnown RBP15.69■□□□□ 0.1
LIMS3-205ENST00000487150 MAGEC2Q9UBF1 373 aaPredicted RBP15.69■□□□□ 0.1
LIMS3-205ENST00000487150 MYO7AQ13402 2215 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 PRUNE2Q8WUY3 3088 aa15.69■□□□□ 0.1
LIMS3-205ENST00000487150 GABRDO14764 452 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 PMM2O15305 246 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 ADAM12O43184 909 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 ASS1P00966 412 aaKnown RBP15.68■□□□□ 0.1
LIMS3-205ENST00000487150 HLA-DRAP01903 254 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 LRG1P02750 347 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 KCNQ1P51787 676 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 STX17P56962 302 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 NOP14P78316 857 aaKnown RBP15.68■□□□□ 0.1
LIMS3-205ENST00000487150 RBM10P98175 930 aaKnown RBP15.68■□□□□ 0.1
LIMS3-205ENST00000487150 PPP3CAQ08209 521 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 SOWAHAQ2M3V2 549 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 TMC5Q6UXY8 1006 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 LIMS2Q7Z4I7 341 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 TMEM130Q8N3G9 435 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 SPPL2BQ8TCT7 592 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 SMG7Q92540 1137 aaKnown RBP15.68■□□□□ 0.1
LIMS3-205ENST00000487150 SRRTQ9BXP5 876 aaKnown RBP15.68■□□□□ 0.1
LIMS3-205ENST00000487150 PRKD2Q9BZL6 878 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 NIF3L1Q9GZT8 377 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 NAT10Q9H0A0 1025 aaKnown RBP15.68■□□□□ 0.1
LIMS3-205ENST00000487150 THAP9Q9H5L6 903 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 MMRN2Q9H8L6 949 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 CYP4F11Q9HBI6 524 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 ABCB6Q9NP58 842 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 NXF1Q9UBU9 619 aaKnown RBP15.68■□□□□ 0.1
LIMS3-205ENST00000487150 CDH9Q9ULB4 789 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 NR2E1Q9Y466 385 aa15.68■□□□□ 0.1
LIMS3-205ENST00000487150 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.68■□□□□ 0.1
LIMS3-205ENST00000487150 CCDC195A0A1B0GUA6 201 aa15.67■□□□□ 0.1
LIMS3-205ENST00000487150 CST3P01034 146 aaPredicted RBP15.67■□□□□ 0.1
LIMS3-205ENST00000487150 BMP1P13497 986 aa15.67■□□□□ 0.1
LIMS3-205ENST00000487150 TUFMP49411 452 aaKnown RBP15.67■□□□□ 0.1
LIMS3-205ENST00000487150 ADCY1Q08828 1119 aa15.67■□□□□ 0.1
LIMS3-205ENST00000487150 INTS6LQ5JSJ4 861 aaKnown RBP15.67■□□□□ 0.1
LIMS3-205ENST00000487150 C1orf220Q5T0J3 134 aa15.67■□□□□ 0.1
LIMS3-205ENST00000487150 RSPO2Q6UXX9 243 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms