RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CEP350Q5VT06 3117 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 CHRNA5P30532 468 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 MOXD1Q6UVY6 613 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 PYROXD1Q8WU10 500 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 ZNF516Q92618 1163 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 TMEM206Q9H813 350 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 KANSL3Q9P2N6 904 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 AGTPBP1Q9UPW5 1226 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 PLIN4Q96Q06 1357 aa13.06□□□□□ -0.32
HSPG2-211ENST00000486901 KCNA3P22001 575 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 SERPINB4P48594 390 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 ZCCHC23Q6ZST2 131 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 CDR2LQ86X02 465 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-211ENST00000486901 STMN2Q93045 179 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 FNBP1Q96RU3 617 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 SMYD3Q9H7B4 428 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 ADGRA3Q8IWK6 1321 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 E5RJQ4 531 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 HAUS5O94927 633 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 MMP10P09238 476 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 SP100P23497 879 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-211ENST00000486901 BRDTQ58F21 947 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-211ENST00000486901 PALM2Q8IXS6 379 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 AGGF1Q8N302 714 aaeCLIP13.05□□□□□ -0.32
HSPG2-211ENST00000486901 EMC1Q8N766 993 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 CFAP61Q8NHU2 1237 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 ASAP3Q8TDY4 903 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 CCDC124Q96CT7 223 aaKnown RBP13.05□□□□□ -0.32
HSPG2-211ENST00000486901 SEL1LQ9UBV2 794 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 TBX20Q9UMR3 447 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 PTPRJQ12913 1337 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 PDE4DIPQ5VU43 2346 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 hCG_2014768A0A024R1R8 64 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 PIK3CDO00329 1044 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 CYB561D2O14569 222 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 ESRRAP11474 423 aaPredicted RBP13.05□□□□□ -0.32
HSPG2-211ENST00000486901 PAPOLAP51003 745 aaKnown RBP13.05□□□□□ -0.32
HSPG2-211ENST00000486901 GPX6P59796 221 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 OSTNP61366 133 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 FYB2Q5VWT5 728 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 KBTBD2Q8IY47 623 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 CEP170P1Q96L14 293 aa13.05□□□□□ -0.32
HSPG2-211ENST00000486901 A6NHS1 94 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 DCTN3O75935 186 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 F7P08709 466 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 CD48P09326 243 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 MYL2P10916 166 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 GNA15P30679 374 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 YARSP54577 528 aaKnown RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 MAMLD1Q13495 774 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 BMPR2Q13873 1038 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 SLC39A4Q6P5W5 647 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 RHOT1Q8IXI2 618 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 FBXO36Q8NEA4 188 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 ACAP3Q96P50 834 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 TMEM120AQ9BXJ8 343 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 LAMB2P55268 1798 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 SPATA31A6Q5VVP1 1343 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 MYPNQ86TC9 1320 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 SORBS2O94875 1100 aaKnown RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 LUC7L3O95232 432 aaKnown RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 ATP6V1C1P21283 382 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 GLRA2P23416 452 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 QARSP47897 775 aaKnown RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 ARFIP2P53365 341 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 PSMC5P62195 406 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 PEX6Q13608 980 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 TAF5Q15542 800 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 CLUL1Q15846 466 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 PDK4Q16654 411 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 AOC3Q16853 763 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 C4orf50Q6ZRC1 276 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 CFAP36Q96G28 342 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 PAFAH2Q99487 392 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.04□□□□□ -0.322e-6■■■■■ 34.4
HSPG2-211ENST00000486901 PIH1D1Q9NWS0 290 aaKnown RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 MAST2Q6P0Q8 1798 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 ADAMTSL1Q8N6G6 1762 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 PROSCO94903 275 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 P4HBP07237 508 aaKnown RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 BRD2P25440 801 aaKnown RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 GMPRP36959 345 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 HADHBP55084 474 aaKnown RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 MTMR1Q13613 665 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 C12orf50Q8NA57 414 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 TMEM143Q96AN5 459 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 PPARGC1AQ9UBK2 798 aaKnown RBP13.04□□□□□ -0.32
HSPG2-211ENST00000486901 STARD13Q9Y3M8 1113 aa13.04□□□□□ -0.32
HSPG2-211ENST00000486901 B2RBV5 119 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 HLA-DRAP01903 254 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 WEE2P0C1S8 567 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 TROVE2P10155 538 aaKnown RBP eCLIP13.03□□□□□ -0.32
HSPG2-211ENST00000486901 PTPN4P29074 926 aa13.03□□□□□ -0.32
HSPG2-211ENST00000486901 HOXA7P31268 230 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-211ENST00000486901 ALDH18A1P54886 795 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms