RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 NRN1LQ496H8 165 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 SPDYCQ5MJ68 293 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 CCDC122Q5T0U0 273 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 IGFL4Q6B9Z1 124 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 DBX2Q6ZNG2 339 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 DOK3Q7L591 496 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 KIAA1328Q86T90 577 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 GAS2L3Q86XJ1 694 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 ERC1Q8IUD2 1116 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 C1orf210Q8IVY1 113 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 Q8N1X5 172 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 CLASRPQ8N2M8 674 aaKnown RBP6.05□□□□□ -1.44
COPS3-209ENST00000486810 PPM1NQ8N819 430 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 SLC35B2Q8TB61 432 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 FAM81AQ8TBF8 368 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 NRG4Q8WWG1 115 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 PGBD4Q96DM1 585 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 RPS6KC1Q96S38 1066 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 NAP1L4Q99733 375 aaKnown RBP6.05□□□□□ -1.44
COPS3-209ENST00000486810 CPPED1Q9BRF8 314 aaPredicted RBP6.05□□□□□ -1.44
COPS3-209ENST00000486810 PDCD2LQ9BRP1 358 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 SLC39A3Q9BRY0 314 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 GPR87Q9BY21 358 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 LRRCC1Q9C099 1032 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 ALDH8A1Q9H2A2 487 aaPredicted RBP6.05□□□□□ -1.44
COPS3-209ENST00000486810 NRDE2Q9H7Z3 1164 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 BCO1Q9HAY6 547 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 HOMER2Q9NSB8 354 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 TUBA8Q9NY65 449 aaPredicted RBP6.05□□□□□ -1.44
COPS3-209ENST00000486810 DDX56Q9NY93 547 aaKnown RBP6.05□□□□□ -1.44
COPS3-209ENST00000486810 RGL1Q9NZL6 768 aa6.05□□□□□ -1.44
COPS3-209ENST00000486810 A0A087WUV0 522 aaPredicted RBP6.04□□□□□ -1.44
COPS3-209ENST00000486810 ERC2O15083 957 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 P4HA2O15460 535 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 CYP27B1O15528 508 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 MFAP3LO75121 409 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 NDUFS2O75306 463 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 AMHP03971 560 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 LDHCP07864 332 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 TSPY4P0CV99 314 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 TSPY10P0CW01 314 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 GNAT2P19087 354 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 TRIM21P19474 475 aaKnown RBP6.04□□□□□ -1.44
COPS3-209ENST00000486810 CCNCP24863 283 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 MAN2A2P49641 1150 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 CCNHP51946 323 aaPredicted RBP6.04□□□□□ -1.44
COPS3-209ENST00000486810 TBX4P57082 545 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 CTAG1AP78358 180 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 KRT85P78386 507 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 SLC25A3Q00325 362 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 MPP3Q13368 585 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 FOXE3Q13461 319 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 NOMO1Q15155 1222 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 MAPRE1Q15691 268 aaKnown RBP6.04□□□□□ -1.44
COPS3-209ENST00000486810 ALDH1L2Q3SY69 923 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 MIIPQ5JXC2 388 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 AGAP9Q5VTM2 703 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 CCBE1Q6UXH8 406 aaPredicted RBP6.04□□□□□ -1.44
COPS3-209ENST00000486810 ZNF572Q7Z3I7 529 aaPredicted RBP6.04□□□□□ -1.44
COPS3-209ENST00000486810 RSPH3Q86UC2 560 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 SYT12Q8IV01 421 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 ATP11CQ8NB49 1132 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 C3orf20Q8ND61 904 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 CACTINQ8WUQ7 758 aaKnown RBP6.04□□□□□ -1.44
COPS3-209ENST00000486810 DPF2Q92785 391 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 RUNDC1Q96C34 613 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 TEKT5Q96M29 485 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 NEUROD6Q96NK8 337 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 ADI1Q9BV57 179 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 BRD8Q9H0E9 1235 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 ZNF703Q9H7S9 590 aaPredicted RBP6.04□□□□□ -1.44
COPS3-209ENST00000486810 XPO7Q9UIA9 1087 aaKnown RBP6.04□□□□□ -1.44
COPS3-209ENST00000486810 SQORQ9Y6N5 450 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 PTPRGP23470 1445 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 ARHGAP31Q2M1Z3 1444 aa6.04□□□□□ -1.44
COPS3-209ENST00000486810 A0A1B0GUA9 196 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 ATP8B1O43520 1251 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 CEP104O60308 925 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 IPO13O94829 963 aaKnown RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 HNRNPCP07910 306 aaKnown RBP eCLIP6.03□□□□□ -1.44
COPS3-209ENST00000486810 ALOX15P16050 662 aaPredicted RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 EDNRBP24530 442 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 ECHS1P30084 290 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 GUCY1A2P33402 732 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 PSMD7P51665 324 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 HDAC4P56524 1084 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 TPM4P67936 248 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 MECOMQ03112 1051 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 TOB2Q14106 344 aaPredicted RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 PTPN21Q16825 1174 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 CCDC152Q4G0S7 254 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 DCAF17Q5H9S7 520 aaPredicted RBP6.03□□□□□ -1.44
COPS3-209ENST00000486810 AKNAD1Q5T1N1 836 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 ANKRD45Q5TZF3 282 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 CRIP3Q6Q6R5 217 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 GBP6Q6ZN66 633 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 MICALCLQ6ZW33 695 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 ARMC9Q7Z3E5 817 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 TMEM110Q86TL2 294 aa6.03□□□□□ -1.44
COPS3-209ENST00000486810 FAM83AQ86UY5 434 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms