RNA–Protein interactions for RNA: ENST00000486229.5

NBPF3-212, Transcript of NBPF member 3, humanhuman

TSL 3

Gene NBPF3, Length 933 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-212ENST00000486229 PRDM12Q9H4Q4 367 aa24.42■■□□□ 1.5
NBPF3-212ENST00000486229 COL4A4P53420 1690 aaPredicted RBP24.42■■□□□ 1.5
NBPF3-212ENST00000486229 VWA8A3KMH1 1905 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 A0A1B0GTH6 734 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.41■■□□□ 1.5
NBPF3-212ENST00000486229 ADH1AP07327 375 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 POU3F3P20264 500 aaPredicted RBP24.41■■□□□ 1.5
NBPF3-212ENST00000486229 WARSP23381 471 aaKnown RBP24.41■■□□□ 1.5
NBPF3-212ENST00000486229 GCNT1Q02742 428 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 PTPN14Q15678 1187 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 CTXN3Q4LDR2 81 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 RTP2Q5QGT7 225 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 WSCD1Q658N2 575 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 PDCL2Q8N4E4 241 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 PCMTD1Q96MG8 357 aaPredicted RBP24.41■■□□□ 1.5
NBPF3-212ENST00000486229 ERGIC2Q96RQ1 377 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 CDCA3Q99618 268 aaPredicted RBP24.41■■□□□ 1.5
NBPF3-212ENST00000486229 CRACR2AQ9BSW2 395 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 BCO2Q9BYV7 579 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 RXFP1Q9HBX9 757 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 RTN4Q9NQC3 1192 aaKnown RBP24.41■■□□□ 1.5
NBPF3-212ENST00000486229 MTRRQ9UBK8 725 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 DPP7Q9UHL4 492 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 RAPGEFL1Q9UHV5 662 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 L1RE1Q9UN81 338 aa24.41■■□□□ 1.5
NBPF3-212ENST00000486229 CHD7Q9P2D1 2997 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 PON1P27169 355 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 NDUFV1P49821 464 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 MFAP3P55082 362 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 ERVFC1P60507 584 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 TSPY1Q01534 308 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 SMARCB1Q12824 385 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 CUL2Q13617 745 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 MRPL58Q14197 206 aaKnown RBP24.4■■□□□ 1.5
NBPF3-212ENST00000486229 SOWAHAQ2M3V2 549 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 PLPP4Q5VZY2 271 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 LIMS2Q7Z4I7 341 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 UNC93AQ86WB7 457 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 TMEM130Q8N3G9 435 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 PPM1KQ8N3J5 372 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 LMO3Q8TAP4 145 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 ACBD6Q9BR61 282 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 APEX2Q9UBZ4 518 aa24.4■■□□□ 1.5
NBPF3-212ENST00000486229 REV3LO60673 3130 aa24.39■■□□□ 1.5
NBPF3-212ENST00000486229 EPOPA6NHQ4 379 aa24.39■■□□□ 1.49
NBPF3-212ENST00000486229 C2CD2LO14523 706 aa24.39■■□□□ 1.49
NBPF3-212ENST00000486229 GNL1P36915 607 aaPredicted RBP24.39■■□□□ 1.49
NBPF3-212ENST00000486229 MAPRE1Q15691 268 aaKnown RBP24.39■■□□□ 1.49
NBPF3-212ENST00000486229 SPOPLQ6IQ16 392 aa24.39■■□□□ 1.49
NBPF3-212ENST00000486229 TAS1R1Q7RTX1 841 aa24.39■■□□□ 1.49
NBPF3-212ENST00000486229 APTXQ7Z2E3 356 aaKnown RBP24.39■■□□□ 1.49
NBPF3-212ENST00000486229 DCP1BQ8IZD4 617 aaKnown RBP24.39■■□□□ 1.49
NBPF3-212ENST00000486229 OR6B3Q8NGW1 331 aa24.39■■□□□ 1.49
NBPF3-212ENST00000486229 LNX1Q8TBB1 728 aaPredicted RBP24.39■■□□□ 1.49
NBPF3-212ENST00000486229 IQCDQ96DY2 449 aa24.39■■□□□ 1.49
NBPF3-212ENST00000486229 TNIP3Q96KP6 325 aa24.39■■□□□ 1.49
NBPF3-212ENST00000486229 NSUN3Q9H649 340 aaKnown RBP24.39■■□□□ 1.49
NBPF3-212ENST00000486229 PLCB1Q9NQ66 1216 aa24.39■■□□□ 1.49
NBPF3-212ENST00000486229 DDX43Q9NXZ2 648 aaKnown RBP24.39■■□□□ 1.49
NBPF3-212ENST00000486229 MAFFQ9ULX9 164 aa24.39■■□□□ 1.49
NBPF3-212ENST00000486229 A0A1W2PQC6 194 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 C2orf71A6NGG8 1288 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 GABRDO14764 452 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 NCK2O43639 380 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 SRGAP2BP0DMP2 458 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 IGFBP6P24592 240 aaPredicted RBP24.38■■□□□ 1.49
NBPF3-212ENST00000486229 DNAJB1P25685 340 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 ASPAP45381 313 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 LRMPQ12912 555 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 RBSNQ9H1K0 784 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 APOBEC3GQ9HC16 384 aaKnown RBP24.38■■□□□ 1.49
NBPF3-212ENST00000486229 POLIQ9UNA4 740 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 TIMM13Q9Y5L4 95 aaPredicted RBP24.38■■□□□ 1.49
NBPF3-212ENST00000486229 TSC2P49815 1807 aa24.38■■□□□ 1.49
NBPF3-212ENST00000486229 LILRB3O75022 631 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 SLC9A1P19634 815 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 CAMK1Q14012 370 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 NR1I3Q14994 352 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 SLC8B1Q6J4K2 584 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 SCARA5Q6ZMJ2 495 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 FMNL3Q8IVF7 1028 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 NEK11Q8NG66 645 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 TATDN2Q93075 761 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 TLE6Q9H808 572 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 CDH9Q9ULB4 789 aa24.37■■□□□ 1.49
NBPF3-212ENST00000486229 BARX2Q9UMQ3 279 aaPredicted RBP24.37■■□□□ 1.49
NBPF3-212ENST00000486229 A8MXQ7 604 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 RFXAPO00287 272 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 IGFBP4P22692 258 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 KLRC2P26717 231 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 PLCB2Q00722 1185 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 INCA1Q0VD86 236 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 SYCP1Q15431 976 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 NFE2Q16621 373 aaPredicted RBP24.36■■□□□ 1.49
NBPF3-212ENST00000486229 TPGS2Q68CL5 300 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 SARM1Q6SZW1 724 aa24.36■■□□□ 1.49
NBPF3-212ENST00000486229 PRSS55Q6UWB4 352 aaPredicted RBP24.36■■□□□ 1.49
NBPF3-212ENST00000486229 C2orf15Q8WU43 125 aaKnown RBP24.36■■□□□ 1.49
NBPF3-212ENST00000486229 ATXN2LQ8WWM7 1075 aaKnown RBP24.36■■□□□ 1.49
NBPF3-212ENST00000486229 B3GALT6Q96L58 329 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms