RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 MRPL17Q9NRX2 175 aaKnown RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 NCDNQ9UBB6 729 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 SIX4Q9UIU6 781 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 RALYQ9UKM9 306 aaKnown RBP13.93□□□□□ -0.18
SSR4-211ENST00000486204 GREB1Q4ZG55 1949 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 DENND4CQ5VZ89 1909 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 OBSL1O75147 1896 aa13.93□□□□□ -0.18
SSR4-211ENST00000486204 PRR5-ARHGAP8B1AHC4 643 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 M0QZQ0 153 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 TEX28O15482 410 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 ITGB3P05106 788 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 DCNP07585 359 aaKnown RBP13.92□□□□□ -0.18
SSR4-211ENST00000486204 ADRB1P08588 477 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 EPCAMP16422 314 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 CCNE1P24864 410 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 PPP1R2P41236 205 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 LILRA4P59901 499 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 MCCD1P59942 119 aaPredicted RBP13.92□□□□□ -0.18
SSR4-211ENST00000486204 DLG4P78352 724 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 ARHGAP8P85298 464 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 C1orf220Q5T0J3 134 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 RBM43Q6ZSC3 357 aaKnown RBP13.92□□□□□ -0.18
SSR4-211ENST00000486204 CCDC149Q6ZUS6 474 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 LNX1Q8TBB1 728 aaPredicted RBP13.92□□□□□ -0.18
SSR4-211ENST00000486204 PARD3BQ8TEW8 1205 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 SLC22A17Q8WUG5 538 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 CCDC127Q96BQ5 260 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 BORCS6Q96GS4 357 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 DHTKD1Q96HY7 919 aaPredicted RBP13.92□□□□□ -0.18
SSR4-211ENST00000486204 RTKNQ9BST9 563 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 TTPALQ9BTX7 342 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 TBC1D17Q9HA65 648 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 FNIP2Q9P278 1114 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 IGSF9Q9P2J2 1179 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 ITGA11Q9UKX5 1188 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 CDV3Q9UKY7 258 aaKnown RBP13.92□□□□□ -0.18
SSR4-211ENST00000486204 SSX2IPQ9Y2D8 614 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 NUB1Q9Y5A7 615 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 MYH10P35580 1976 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 DOCK8Q8NF50 2099 aa13.92□□□□□ -0.18
SSR4-211ENST00000486204 ACACBO00763 2458 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 LRRIQ3A6PVS8 624 aaPredicted RBP13.91□□□□□ -0.18
SSR4-211ENST00000486204 PSMA7O14818 248 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 SYN3O14994 580 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 TRAPPC3O43617 180 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 TBC1D4O60343 1298 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 MBD3O95983 291 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 TMEM191BP0C7N4 346 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 DLATP10515 647 aaKnown RBP13.91□□□□□ -0.18
SSR4-211ENST00000486204 RPL17P18621 184 aaKnown RBP13.91□□□□□ -0.18
SSR4-211ENST00000486204 POLR2BP30876 1174 aaKnown RBP13.91□□□□□ -0.18
SSR4-211ENST00000486204 LRRC63Q05C16 580 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 MRPL58Q14197 206 aaKnown RBP13.91□□□□□ -0.18
SSR4-211ENST00000486204 PSMD5Q16401 504 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 CEP135Q66GS9 1140 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 TTI2Q6NXR4 508 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 FOXR2Q6PJQ5 311 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 CEP57Q86XR8 500 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 FEZF2Q8TBJ5 459 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 CACTINQ8WUQ7 758 aaKnown RBP13.91□□□□□ -0.18
SSR4-211ENST00000486204 EEF2KMTQ96G04 330 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 DUSP9Q99956 384 aaKnown RBP13.91□□□□□ -0.18
SSR4-211ENST00000486204 MKNK1Q9BUB5 465 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 MTRRQ9UBK8 725 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 CA14Q9ULX7 337 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 PCDHB8Q9UN66 801 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 SIT1Q9Y3P8 196 aa13.91□□□□□ -0.18
SSR4-211ENST00000486204 ADAM12O43184 909 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 RPL13P26373 211 aaKnown RBP13.9□□□□□ -0.18
SSR4-211ENST00000486204 TAF6P49848 677 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 CLCN4P51793 760 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 ADAM9Q13443 819 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 STIM1Q13586 685 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 DUOXA2Q1HG44 320 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 RSPO2Q6UXX9 243 aaPredicted RBP13.9□□□□□ -0.18
SSR4-211ENST00000486204 TRAPPC11Q7Z392 1133 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 GPR149Q86SP6 731 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 FAM186BQ8IYM0 893 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 LRRC52Q8N7C0 313 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 TMC2Q8TDI7 906 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 ANKRD36BP1Q96IX9 119 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 MED15Q96RN5 788 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 FNBP1Q96RU3 617 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 CLSTN3Q9BQT9 956 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 EMILIN2Q9BXX0 1053 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.9□□□□□ -0.188e-7■□□□□ 11.2
SSR4-211ENST00000486204 DLGAP2Q9P1A6 1054 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 AGAP1Q9UPQ3 857 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 CTNND2Q9UQB3 1225 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 FRMD4BQ9Y2L6 1034 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 BACE2Q9Y5Z0 518 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 ZNF638Q14966 1978 aaKnown RBP13.9□□□□□ -0.18
SSR4-211ENST00000486204 PATJQ8NI35 1801 aa13.9□□□□□ -0.18
SSR4-211ENST00000486204 CEP250Q9BV73 2442 aa13.89□□□□□ -0.19
SSR4-211ENST00000486204 TNNC2P02585 160 aa13.89□□□□□ -0.19
SSR4-211ENST00000486204 ADH1AP07327 375 aa13.89□□□□□ -0.19
SSR4-211ENST00000486204 TNNI1P19237 187 aa13.89□□□□□ -0.19
SSR4-211ENST00000486204 PAX3P23760 479 aa13.89□□□□□ -0.19
SSR4-211ENST00000486204 PSMC2P35998 433 aaKnown RBP13.89□□□□□ -0.19
SSR4-211ENST00000486204 FKBP3Q00688 224 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms