RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 UNC13DQ70J99 1090 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 CCDC186Q7Z3E2 898 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 SPC24Q8NBT2 197 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 NKD2Q969F2 451 aaPredicted RBP10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 ZSWIM3Q96MP5 696 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 ACAP3Q96P50 834 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 CCDC94Q9BW85 323 aaPredicted RBP10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 TRIM9Q9C026 710 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 XPO4Q9C0E2 1151 aaKnown RBP10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 IRF2BPLQ9H1B7 796 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 IKZF4Q9H2S9 585 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 RRAGDQ9NQL2 400 aaPredicted RBP10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 SLC2A4RGQ9NR83 387 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 EXOC1Q9NV70 894 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 FANCLQ9NW38 375 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 IFNKQ9P0W0 207 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 ANKFY1Q9P2R3 1169 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 FBXL5Q9UKA1 691 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 SIT1Q9Y3P8 196 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 BACE2Q9Y5Z0 518 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 DCHS1Q96JQ0 3298 aa10.17□□□□□ -0.78
TMEM39A-208ENST00000486159 C2orf72A6NCS6 295 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 KLRC4O43908 158 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 MOSPD3O75425 235 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 ABLIM3O94929 683 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 PLA2G4BP0C869 781 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 CXCL8P10145 99 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 MCF2P10911 925 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 KCNE1P15382 129 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 RFX1P22670 979 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 YARSP54577 528 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 STARD6P59095 220 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 FOXK1P85037 733 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 DMP1Q13316 513 aaPredicted RBP10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 MRPL58Q14197 206 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 GRM2Q14416 872 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 TPD52L1Q16890 204 aaPredicted RBP10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 KMT5BQ4FZB7 885 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 FILIP1LQ4L180 1135 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 SLC44A4Q53GD3 710 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 PRSS36Q5K4E3 855 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 CDKAL1Q5VV42 579 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 SCARA3Q6AZY7 606 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 PHLDB3Q6NSJ2 640 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 RNF19BQ6ZMZ0 732 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 DCLK2Q8N568 766 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 SYT2Q8N9I0 419 aaPredicted RBP10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 NXPE3Q969Y0 559 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 TMEM209Q96SK2 561 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 CORO1BQ9BR76 489 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 NTPCRQ9BSD7 190 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 BLZF1Q9H2G9 400 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 CRISPLD1Q9H336 500 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 CYP4F11Q9HBI6 524 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 BLOC1S4Q9NUP1 217 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 CNTN3Q9P232 1028 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 MRPS23Q9Y3D9 190 aaKnown RBP10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 ANK1P16157 1881 aa10.16□□□□□ -0.78
TMEM39A-208ENST00000486159 LRRC10BA6NIK2 292 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 LACTBL1A8MY62 500 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 TISP43B9A030 160 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 XYLBO75191 536 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 KIF20AO95235 890 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 FGFR1OPO95684 399 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 SP9P0CG40 484 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 PLS3P13797 630 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 FCARP24071 287 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 GUCY2CP25092 1073 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 HOXA9P31269 272 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 ASIC1P78348 528 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 MCM6Q14566 821 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 MLF2Q15773 248 aaPredicted RBP10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 CTXN3Q4LDR2 81 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 SLC8B1Q6J4K2 584 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 SLC39A4Q6P5W5 647 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 TSSK4Q6SA08 328 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 ANKS3Q6ZW76 656 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 FAM114A1Q8IWE2 563 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 CCDC112Q8NEF3 446 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 PJA1Q8NG27 643 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 ZNF461Q8TAF7 563 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 NELFBQ8WX92 580 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 DDX12PQ92771 950 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 DRC1Q96MC2 740 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 UROC1Q96N76 676 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 PGLYRP2Q96PD5 576 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 THAP9Q9H5L6 903 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 HEBP1Q9NRV9 189 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 CEP72Q9P209 647 aa10.15□□□□□ -0.78
TMEM39A-208ENST00000486159 MIA3Q5JRA6 1907 aa10.15□□□□□ -0.79
TMEM39A-208ENST00000486159 FASNP49327 2511 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 A0A1B0GTH6 734 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 KANSL1LA0AUZ9 987 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 ARHGEF37A1IGU5 675 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 FAM170BA6NMN3 283 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 PRRG1O14668 218 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 FAM189A1O60320 539 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 TOM1L1O75674 476 aa10.14□□□□□ -0.79
TMEM39A-208ENST00000486159 SOAT2O75908 522 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms