RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ZNF569Q5MCW4 686 aa15.38■□□□□ 0.05
COL9A1-207ENST00000486080 TMEM176AQ96HP8 235 aa15.38■□□□□ 0.05
COL9A1-207ENST00000486080 ISCUQ9H1K1 167 aa15.38■□□□□ 0.05
COL9A1-207ENST00000486080 DNAI1Q9UI46 699 aa15.38■□□□□ 0.05
COL9A1-207ENST00000486080 RTN2O75298 545 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 GZMAP12544 262 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 CD19P15391 556 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 ABCB4P21439 1286 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 RPL9P32969 192 aaKnown RBP15.37■□□□□ 0.05
COL9A1-207ENST00000486080 GATMP50440 423 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 NOMO2Q5JPE7 1267 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 LIMS2Q7Z4I7 341 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 ZNF280BQ86YH2 543 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 KBTBD7Q8WVZ9 684 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 CYFIP2Q96F07 1278 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 PDCL3Q9H2J4 239 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 L1RE1Q9UN81 338 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 PCDHB7Q9Y5E2 793 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 ALPK3Q96L96 1907 aa15.37■□□□□ 0.05
COL9A1-207ENST00000486080 KIF2AO00139 706 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-207ENST00000486080 CYB561D2O14569 222 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 BUB1O43683 1085 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 DDHD2O94830 711 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 MOCS3O95396 460 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 TIMP1P01033 207 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 PAEPP09466 180 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 UNGP13051 313 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-207ENST00000486080 TUSC3Q13454 348 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 UBE2Q1Q7Z7E8 422 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 CRIPAKQ8N1N5 446 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 SLC35F6Q8N357 371 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 TXLNBQ8N3L3 684 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 APPL2Q8NEU8 664 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 CPA5Q8WXQ8 436 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 THAP2Q9H0W7 228 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 ELAC1Q9H777 363 aaKnown RBP15.36■□□□□ 0.05
COL9A1-207ENST00000486080 INTUQ9ULD6 942 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 F8W810 466 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 CYP1A1P04798 512 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-207ENST00000486080 PAN2Q504Q3 1202 aaKnown RBP15.36■□□□□ 0.05
COL9A1-207ENST00000486080 NAA35Q5VZE5 725 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 SMYD5Q6GMV2 418 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 ACAD10Q6JQN1 1059 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 CD300LGQ6UXG3 332 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 PDCL2Q8N4E4 241 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 OR6B3Q8NGW1 331 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 SECISBP2LQ93073 1101 aaKnown RBP15.36■□□□□ 0.05
COL9A1-207ENST00000486080 ARHGEF26Q96DR7 871 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 SENP8Q96LD8 212 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 HEXIM2Q96MH2 286 aaKnown RBP15.36■□□□□ 0.05
COL9A1-207ENST00000486080 LPIN3Q9BQK8 851 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 NT5C1AQ9BXI3 368 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 FAM124BQ9H5Z6 455 aaPredicted RBP15.36■□□□□ 0.05
COL9A1-207ENST00000486080 TBC1D13Q9NVG8 400 aa15.36■□□□□ 0.05
COL9A1-207ENST00000486080 FNDC1Q4ZHG4 1894 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-207ENST00000486080 ANKRD62A6NC57 917 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 I3L4J1 428 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 KIAA0355O15063 1070 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 HUS1O60921 280 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 TACC1O75410 805 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 PDGFRBP09619 1106 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 TMEM253P0C7T8 217 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 CSF2RAP15509 400 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 CAPN2P17655 700 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 LMO2P25791 158 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL9A1-207ENST00000486080 DPH6Q7L8W6 267 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 ACOT1Q86TX2 421 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 OSTM1Q86WC4 334 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 TTC39CQ8N584 583 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 C12orf29Q8N999 325 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 URGCPQ8TCY9 931 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 CASD1Q96PB1 797 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 DPEP3Q9H4B8 488 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 CHORDC1Q9UHD1 332 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-207ENST00000486080 LRFN2Q9ULH4 789 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-207ENST00000486080 CAPN6Q9Y6Q1 641 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 ATP8B3O60423 1300 aa15.35■□□□□ 0.05
COL9A1-207ENST00000486080 A8MXQ7 604 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 ATMINO43313 823 aaPredicted RBP15.34■□□□□ 0.05
COL9A1-207ENST00000486080 B3GAT3O94766 335 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 ITGB1P05556 798 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 RAG1P15918 1043 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 GNL1P36915 607 aaPredicted RBP15.34■□□□□ 0.05
COL9A1-207ENST00000486080 NOMO3P69849 1222 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 DSC1Q08554 894 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 TIGD5Q53EQ6 642 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 WSCD1Q658N2 575 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 DENND1BQ6P3S1 775 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 CNKSR3Q6P9H4 555 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 ADGRF2Q8IZF7 708 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 TOP6BLQ8N6T0 577 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 HASPINQ8TF76 798 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 CTNNBL1Q8WYA6 563 aaPredicted RBP15.34■□□□□ 0.05
COL9A1-207ENST00000486080 DDX27Q96GQ7 796 aaKnown RBP15.34■□□□□ 0.05
COL9A1-207ENST00000486080 SNX25Q9H3E2 840 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 DNAJB4Q9UDY4 337 aa15.34■□□□□ 0.05
COL9A1-207ENST00000486080 TIMM13Q9Y5L4 95 aaPredicted RBP15.34■□□□□ 0.05
COL9A1-207ENST00000486080 LTBP2Q14767 1821 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms