RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 EXOC3O60645 756 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 HUS1O60921 280 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 CLSTN1O94985 981 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 CYP11A1P05108 521 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 PRR29P0C7W0 189 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 PLA2G5P39877 138 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 CCR2P41597 374 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 GPC5P78333 572 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 EHHADHQ08426 723 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 SURF1Q15526 300 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 KNOP1Q1ED39 458 aaKnown RBP19.01■□□□□ 0.63
COL6A1-204ENST00000486023 DUOXA2Q1HG44 320 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 MTSS1LQ765P7 747 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 TTC9BQ8N6N2 239 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 XXYLT1Q8NBI6 393 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 RTP3Q9BQQ7 232 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 ZCWPW1Q9H0M4 648 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 KIAA1586Q9HCI6 787 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 ASAH2Q9NR71 780 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 USP25Q9UHP3 1055 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 ITGA11Q9UKX5 1188 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 MAFFQ9ULX9 164 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 HPSEQ9Y251 543 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 DENND4AQ7Z401 1863 aa19.01■□□□□ 0.63
COL6A1-204ENST00000486023 RPN1P04843 607 aaKnown RBP19■□□□□ 0.63
COL6A1-204ENST00000486023 SRFP11831 508 aa19■□□□□ 0.63
COL6A1-204ENST00000486023 ACAT1P24752 427 aaKnown RBP19■□□□□ 0.63
COL6A1-204ENST00000486023 PLD1Q13393 1074 aa19■□□□□ 0.63
COL6A1-204ENST00000486023 LRRTM3Q86VH5 581 aa19■□□□□ 0.63
COL6A1-204ENST00000486023 GPIHBP1Q8IV16 184 aa19■□□□□ 0.63
COL6A1-204ENST00000486023 PDCL2Q8N4E4 241 aa19■□□□□ 0.63
COL6A1-204ENST00000486023 GIPC2Q8TF65 315 aa19■□□□□ 0.63
COL6A1-204ENST00000486023 SLITRK6Q9H5Y7 841 aa19■□□□□ 0.63
COL6A1-204ENST00000486023 DDX43Q9NXZ2 648 aaKnown RBP19■□□□□ 0.63
COL6A1-204ENST00000486023 ABI2Q9NYB9 513 aaPredicted RBP19■□□□□ 0.63
COL6A1-204ENST00000486023 SIX4Q9UIU6 781 aa19■□□□□ 0.63
COL6A1-204ENST00000486023 PDCD11Q14690 1871 aaKnown RBP19■□□□□ 0.63
COL6A1-204ENST00000486023 UBE4BO95155 1302 aa19■□□□□ 0.63
COL6A1-204ENST00000486023 GOLGA6L4A6NEF3 574 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 MYO1EQ12965 1108 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 TEAD2Q15562 447 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 TAF12Q16514 161 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 PRSS36Q5K4E3 855 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 ASTLQ6HA08 431 aaPredicted RBP18.99■□□□□ 0.63
COL6A1-204ENST00000486023 POTEHQ6S545 545 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 DCP1BQ8IZD4 617 aaKnown RBP18.99■□□□□ 0.63
COL6A1-204ENST00000486023 TMEM105Q8N8V8 129 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 CCDC47Q96A33 483 aaKnown RBP18.99■□□□□ 0.63
COL6A1-204ENST00000486023 HPDLQ96IR7 371 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 ZSWIM3Q96MP5 696 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 GOLPH3LQ9H4A5 285 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 GDE1Q9NZC3 331 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 L1RE1Q9UN81 338 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 MAPK8IP1Q9UQF2 711 aa18.99■□□□□ 0.63
COL6A1-204ENST00000486023 A0A1W2PRU2 124 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 NRG2O14511 850 aaPredicted RBP18.98■□□□□ 0.63
COL6A1-204ENST00000486023 TSPY1Q01534 308 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 CYP24A1Q07973 514 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 PSMD2Q13200 908 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 BMT2Q1RMZ1 405 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 TANGO2Q6ICL3 276 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 DNAJB7Q7Z6W7 309 aaPredicted RBP18.98■□□□□ 0.63
COL6A1-204ENST00000486023 WDR49Q8IV35 697 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 LRRC52Q8N7C0 313 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 KIAA0895Q8NCT3 520 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 PRSS33Q8NF86 280 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 MMS19Q96T76 1030 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 LPIN3Q9BQK8 851 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 PLA2G2FQ9BZM2 168 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 DNAJC25Q9H1X3 360 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 WNT16Q9UBV4 365 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 WDFY4Q6ZS81 3184 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 DOCK6Q96HP0 2047 aa18.98■□□□□ 0.63
COL6A1-204ENST00000486023 KRBA1A5PL33 1030 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 HCRTO43612 131 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 PI15O43692 258 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 PHACTR2O75167 634 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 ZNF202O95125 648 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 TUFMP49411 452 aaKnown RBP18.97■□□□□ 0.63
COL6A1-204ENST00000486023 CASP4P49662 377 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 SNRPFP62306 86 aaKnown RBP18.97■□□□□ 0.63
COL6A1-204ENST00000486023 NUCB2P80303 420 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 MYL7Q01449 175 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 SNW1Q13573 536 aaKnown RBP18.97■□□□□ 0.63
COL6A1-204ENST00000486023 FAM78AQ5JUQ0 283 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 KRBA2Q6ZNG9 492 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 TRAPPC11Q7Z392 1133 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 CXorf38Q8TB03 319 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 PI4K2AQ9BTU6 479 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 ATXN3LQ9H3M9 355 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 AVENQ9NQS1 362 aaPredicted RBP18.97■□□□□ 0.63
COL6A1-204ENST00000486023 TMLHEQ9NVH6 421 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 ARIH1Q9Y4X5 557 aaPredicted RBP18.97■□□□□ 0.63
COL6A1-204ENST00000486023 PCDHB5Q9Y5E4 795 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 ZDBF2Q9HCK1 2354 aa18.97■□□□□ 0.63
COL6A1-204ENST00000486023 A0A1W2PQ27 194 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 A0A1W2PQ64 194 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 A0A1W2PQD8 194 aa18.96■□□□□ 0.63
COL6A1-204ENST00000486023 PRPF40AO75400 957 aaKnown RBP18.96■□□□□ 0.63
COL6A1-204ENST00000486023 CST3P01034 146 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms