RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 VN1R2Q8NFZ6 395 aa25.34■■□□□ 1.65
ABCF3-216ENST00000485921 SPATA18Q8TC71 538 aa25.34■■□□□ 1.65
ABCF3-216ENST00000485921 TUBGCP2Q9BSJ2 902 aa25.34■■□□□ 1.65
ABCF3-216ENST00000485921 APOBEC3GQ9HC16 384 aaKnown RBP25.34■■□□□ 1.65
ABCF3-216ENST00000485921 CLDND1Q9NY35 253 aa25.34■■□□□ 1.65
ABCF3-216ENST00000485921 HCFC2Q9Y5Z7 792 aa25.34■■□□□ 1.65
ABCF3-216ENST00000485921 OR6C75A6NL08 312 aa25.33■■□□□ 1.65
ABCF3-216ENST00000485921 SMTNL1A8MU46 457 aa25.33■■□□□ 1.65
ABCF3-216ENST00000485921 GLUD1P00367 558 aa25.33■■□□□ 1.65
ABCF3-216ENST00000485921 PRKCSHP14314 528 aaPredicted RBP25.33■■□□□ 1.65
ABCF3-216ENST00000485921 KCNC3Q14003 757 aa25.33■■□□□ 1.65
ABCF3-216ENST00000485921 COL19A1Q14993 1142 aa25.33■■□□□ 1.65
ABCF3-216ENST00000485921 CTC1Q2NKJ3 1217 aa25.33■■□□□ 1.65
ABCF3-216ENST00000485921 WDR44Q5JSH3 913 aa25.33■■□□□ 1.65
ABCF3-216ENST00000485921 EP400NLQ6ZTU2 488 aa25.33■■□□□ 1.65
ABCF3-216ENST00000485921 OSTM1Q86WC4 334 aa25.33■■□□□ 1.65
ABCF3-216ENST00000485921 PABPC5Q96DU9 382 aaKnown RBP25.33■■□□□ 1.65
ABCF3-216ENST00000485921 RTP3Q9BQQ7 232 aa25.33■■□□□ 1.65
ABCF3-216ENST00000485921 GABRDO14764 452 aa25.32■■□□□ 1.64
ABCF3-216ENST00000485921 TGM5O43548 720 aa25.32■■□□□ 1.64
ABCF3-216ENST00000485921 TACC1O75410 805 aa25.32■■□□□ 1.64
ABCF3-216ENST00000485921 FAM163BP0C2L3 166 aa25.32■■□□□ 1.64
ABCF3-216ENST00000485921 EPCAMP16422 314 aa25.32■■□□□ 1.64
ABCF3-216ENST00000485921 WARSP23381 471 aaKnown RBP25.32■■□□□ 1.64
ABCF3-216ENST00000485921 LHX1P48742 406 aa25.32■■□□□ 1.64
ABCF3-216ENST00000485921 ROR1Q01973 937 aa25.32■■□□□ 1.64
ABCF3-216ENST00000485921 SCARA5Q6ZMJ2 495 aa25.32■■□□□ 1.64
ABCF3-216ENST00000485921 KBTBD7Q8WVZ9 684 aa25.32■■□□□ 1.64
ABCF3-216ENST00000485921 MRPL45Q9BRJ2 306 aaKnown RBP25.32■■□□□ 1.64
ABCF3-216ENST00000485921 SMYD3Q9H7B4 428 aa25.32■■□□□ 1.64
ABCF3-216ENST00000485921 DDX43Q9NXZ2 648 aaKnown RBP25.32■■□□□ 1.64
ABCF3-216ENST00000485921 REV3LO60673 3130 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 TSC2P49815 1807 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 CAVIN2O95810 425 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 GLP2RO95838 553 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 C1RP00736 705 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 SPATA31D3P0C874 917 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 IQCB1Q15051 598 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 VWA3BQ502W6 1294 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 LILRA6Q6PI73 481 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 TMEM184AQ6ZMB5 413 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 SPATA31D4Q6ZUB0 917 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 OR10T2Q8NGX3 314 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 CASP10Q92851 521 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 TMEM209Q96SK2 561 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 NIF3L1Q9GZT8 377 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 HSD3B7Q9H2F3 369 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 SNX25Q9H3E2 840 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 CBX8Q9HC52 389 aa25.31■■□□□ 1.64
ABCF3-216ENST00000485921 WDR27A2RRH5 827 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 BECN2A8MW95 431 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 OR4Q2P0C623 313 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 SRGAP2BP0DMP2 458 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 CPB1P15086 417 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 CDK11BP21127 795 aaKnown RBP25.3■■□□□ 1.64
ABCF3-216ENST00000485921 ASPAP45381 313 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 RAP1GAPP47736 663 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 CDH8P55286 799 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 KRT31Q15323 416 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 MIIPQ5JXC2 388 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 LRSAM1Q6UWE0 723 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 TATDN2Q93075 761 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 ACBD6Q9BR61 282 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 SDCBP2Q9H190 292 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 NDST4Q9H3R1 872 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 TAB2Q9NYJ8 693 aa25.3■■□□□ 1.64
ABCF3-216ENST00000485921 EYSQ5T1H1 3165 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 HCRTO43612 131 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 WEE2P0C1S8 567 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 ZNF18P17022 549 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 ACAT1P24752 427 aaKnown RBP25.29■■□□□ 1.64
ABCF3-216ENST00000485921 LMO2P25791 158 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 GNL1P36915 607 aaPredicted RBP25.29■■□□□ 1.64
ABCF3-216ENST00000485921 EHBP1Q8NDI1 1231 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 ANKRD20A12PQ8NF67 263 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 OR6B3Q8NGW1 331 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 ZNF461Q8TAF7 563 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 LMO3Q8TAP4 145 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 HLA-CQ95604 372 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 BCO2Q9BYV7 579 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 ZCWPW1Q9H0M4 648 aa25.29■■□□□ 1.64
ABCF3-216ENST00000485921 BARX2Q9UMQ3 279 aaPredicted RBP25.29■■□□□ 1.64
ABCF3-216ENST00000485921 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.28■■□□□ 1.64
ABCF3-216ENST00000485921 PES1O00541 588 aaKnown RBP25.28■■□□□ 1.64
ABCF3-216ENST00000485921 TBX10O75333 385 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 ABLIM3O94929 683 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 PCSK1P29120 753 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 LTBRP36941 435 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 TSPY1Q01534 308 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 DLX2Q07687 328 aaPredicted RBP25.28■■□□□ 1.64
ABCF3-216ENST00000485921 LRMPQ12912 555 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 TPGS2Q68CL5 300 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 KREMEN2Q8NCW0 462 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 FAXDC2Q96IV6 333 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 INTS2Q9H0H0 1204 aaKnown RBP25.28■■□□□ 1.64
ABCF3-216ENST00000485921 TSPY26PQ9H489 355 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 UBE2ZQ9H832 354 aaPredicted RBP25.28■■□□□ 1.64
ABCF3-216ENST00000485921 CYP3A43Q9HB55 503 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 MAN1C1Q9NR34 630 aa25.28■■□□□ 1.64
ABCF3-216ENST00000485921 CLEC1BQ9P126 229 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms