RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 BRCC3P46736 316 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 NRIP1P48552 1158 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 FMO5P49326 533 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 MYL6P60660 151 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 DLG4P78352 724 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 ZP2Q05996 745 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 KCNH2Q12809 1159 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 KCNJ12Q14500 433 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 CLUL1Q15846 466 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 NFE2Q16621 373 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-208ENST00000485618 MAN2A1Q16706 1144 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 DUSP6Q16828 381 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 TCP11X2Q5H9J9 407 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 LIN9Q5TKA1 542 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 TDRD10Q5VZ19 366 aaKnown RBP8.86□□□□□ -0.99
SF3A1-208ENST00000485618 LMBRD2Q68DH5 695 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-208ENST00000485618 SMYD5Q6GMV2 418 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 CES5AQ6NT32 575 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 CYP26C1Q6V0L0 522 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 GBP6Q6ZN66 633 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 CCDC149Q6ZUS6 474 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 TAS1R1Q7RTX1 841 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 RBM23Q86U06 439 aaKnown RBP8.86□□□□□ -0.99
SF3A1-208ENST00000485618 TRIM59Q8IWR1 403 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 ZNF461Q8TAF7 563 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 LNX1Q8TBB1 728 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-208ENST00000485618 C2orf15Q8WU43 125 aaKnown RBP8.86□□□□□ -0.99
SF3A1-208ENST00000485618 BCL7CQ8WUZ0 217 aaPredicted RBP8.86□□□□□ -0.99
SF3A1-208ENST00000485618 ZNF516Q92618 1163 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 SLC35C1Q96A29 364 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 TNIP3Q96KP6 325 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 KLHL5Q96PQ7 755 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 ACBD6Q9BR61 282 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 TUBGCP2Q9BSJ2 902 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 DNAJC25Q9H1X3 360 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 MTRRQ9UBK8 725 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 NXF1Q9UBU9 619 aaKnown RBP8.86□□□□□ -0.99
SF3A1-208ENST00000485618 PRKAG3Q9UGI9 489 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 SIX4Q9UIU6 781 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 BRWD1Q9NSI6 2320 aa8.86□□□□□ -0.99
SF3A1-208ENST00000485618 MYO7AQ13402 2215 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 GTPBP10A4D1E9 387 aaKnown RBP8.85□□□□□ -0.99
SF3A1-208ENST00000485618 HIDE1A8MVS5 230 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 I3L4J1 428 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 PRRG1O14668 218 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 TEX28O15482 410 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 LILRB3O75022 631 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 CLASP2O75122 1294 aaKnown RBP8.85□□□□□ -0.99
SF3A1-208ENST00000485618 TACC1O75410 805 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 ASS1P00966 412 aaKnown RBP8.85□□□□□ -0.99
SF3A1-208ENST00000485618 CST3P01034 146 aaPredicted RBP8.85□□□□□ -0.99
SF3A1-208ENST00000485618 TPM3P06753 285 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 CPB1P15086 417 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 TKTP29401 623 aaKnown RBP8.85□□□□□ -0.99
SF3A1-208ENST00000485618 OR1D2P34982 312 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 TUFMP49411 452 aaKnown RBP8.85□□□□□ -0.99
SF3A1-208ENST00000485618 PPP3CAQ08209 521 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 PLD1Q13393 1074 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 CAMK1Q14012 370 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 RAB33AQ14088 237 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 MRPL58Q14197 206 aaKnown RBP8.85□□□□□ -0.99
SF3A1-208ENST00000485618 COL19A1Q14993 1142 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 UVSSAQ2YD98 709 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 VWA3BQ502W6 1294 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 RTP2Q5QGT7 225 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 SLC8B1Q6J4K2 584 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 CD300LGQ6UXG3 332 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 C4orf50Q6ZRC1 276 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 C15orf39Q6ZRI6 1047 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 ENOSF1Q7L5Y1 443 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 UNC93AQ86WB7 457 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 ADHFE1Q8IWW8 467 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 ADGRF2Q8IZF7 708 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 ELMOD1Q8N336 334 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 PDCL2Q8N4E4 241 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 C3orf58Q8NDZ4 430 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 OR6B3Q8NGW1 331 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 JAKMIP2Q96AA8 810 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 NT5C1BQ96P26 610 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 VN1R3Q9BXE9 311 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 TSPY26PQ9H489 355 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 DDX43Q9NXZ2 648 aaKnown RBP8.85□□□□□ -0.99
SF3A1-208ENST00000485618 CACNG4Q9UBN1 327 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 CDH9Q9ULB4 789 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 COQ4Q9Y3A0 265 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 CDY1Q9Y6F8 540 aa8.85□□□□□ -0.99
SF3A1-208ENST00000485618 ATP8B3O60423 1300 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 PTPRJQ12913 1337 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 ATG2AQ2TAZ0 1938 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 A8MXQ7 604 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 F8W810 466 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 PER2O15055 1255 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 SPTLC1O15269 473 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 XYLBO75191 536 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 WARSP23381 471 aaKnown RBP8.84□□□□□ -0.99
SF3A1-208ENST00000485618 IRS1P35568 1242 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 ALDH1A3P47895 512 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 MRE11P49959 708 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 ARPP19P56211 112 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 WNT7BP56706 349 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms