RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 A0A0B4J269 797 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 ANO9A1A5B4 782 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 SLC38A8A6NNN8 435 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 SOBPA7XYQ1 873 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 CHURC1-FNTBB4DL54 471 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 PIRO00625 290 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 TNFSF9P41273 254 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 FNTBP49356 437 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 LIG4P49917 911 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 ZNF131P52739 623 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 SPAG1Q07617 926 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 RAD51AP2Q09MP3 1159 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 ARHGAP15Q53QZ3 475 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 STXBP5Q5T5C0 1151 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 PRR23CQ6ZRP0 262 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 PRR23BQ6ZRT6 265 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 C2orf15Q8WU43 125 aaKnown RBP14.12□□□□□ -0.15
HDAC6-227ENST00000485102 DDX1Q92499 740 aaKnown RBP14.12□□□□□ -0.15
HDAC6-227ENST00000485102 LOXL4Q96JB6 756 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 SENP8Q96LD8 212 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 AK8Q96MA6 479 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 KIF2CQ99661 725 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 BACH2Q9BYV9 841 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 ATXN3LQ9H3M9 355 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 TASP1Q9H6P5 420 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 RPF1Q9H9Y2 349 aaKnown RBP14.12□□□□□ -0.15
HDAC6-227ENST00000485102 RBM12Q9NTZ6 932 aaKnown RBP14.12□□□□□ -0.15
HDAC6-227ENST00000485102 CPSF3Q9UKF6 684 aaKnown RBP14.12□□□□□ -0.15
HDAC6-227ENST00000485102 DSEQ9UL01 958 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 TBX20Q9UMR3 447 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 SLC27A5Q9Y2P5 690 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 KIF3AQ9Y496 699 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.12□□□□□ -0.15
HDAC6-227ENST00000485102 SCN1AP35498 2009 aa14.12□□□□□ -0.15
HDAC6-227ENST00000485102 DPYSL4O14531 572 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 HNRNPDLO14979 420 aaKnown RBP14.11□□□□□ -0.15
HDAC6-227ENST00000485102 ODC1P11926 461 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 GABRR2P28476 465 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 CDC25CP30307 473 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 MATR3P43243 847 aaKnown RBP eCLIP14.11□□□□□ -0.15
HDAC6-227ENST00000485102 SOX9P48436 509 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 LIMK1P53667 647 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 CACNB1Q02641 598 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-227ENST00000485102 DMWDQ09019 674 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 PTPAQ15257 358 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 LPAL2Q16609 132 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 GPR158Q5T848 1215 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 C9orf57Q5W0N0 161 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 Q6ZS52 159 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 WDR5BQ86VZ2 330 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 TMEM130Q8N3G9 435 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 BPIFB1Q8TDL5 484 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 BICD1Q96G01 975 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 CCSER1Q9C0I3 900 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 ZCWPW1Q9H0M4 648 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 ASB7Q9H672 318 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 IL21Q9HBE4 155 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 GTSE1Q9NYZ3 720 aa14.11□□□□□ -0.15
HDAC6-227ENST00000485102 GREB1Q4ZG55 1949 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 DENND4CQ5VZ89 1909 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-227ENST00000485102 PPEF2O14830 753 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 GUCY2FP51841 1108 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 GTF2BQ00403 316 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 ZRSR1Q15695 479 aaKnown RBP14.1□□□□□ -0.15
HDAC6-227ENST00000485102 ITPRIPL2Q3MIP1 535 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 TTC9BQ8N6N2 239 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 OR10T2Q8NGX3 314 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 FAM200AQ8TCP9 573 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 CDK5RAP3Q96JB5 506 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 TMEM209Q96SK2 561 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 FIZ1Q96SL8 496 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 FAM83CQ9BQN1 747 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 PARVGQ9HBI0 331 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 THG1LQ9NWX6 298 aaKnown RBP14.1□□□□□ -0.15
HDAC6-227ENST00000485102 C2CD2Q9Y426 696 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 STYXL1Q9Y6J8 313 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 ANK1P16157 1881 aa14.1□□□□□ -0.15
HDAC6-227ENST00000485102 KIF26AQ9ULI4 1882 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-227ENST00000485102 NPHP3-ACAD11A0A0J9YXS1 232 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 VWA3AA6NCI4 1184 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 TM4SF5O14894 197 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 PRAMEF12O95522 483 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 MCM2P49736 904 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 VEPH1Q14D04 833 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 PON2Q15165 354 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 TMEM196Q5HYL7 178 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 PPM1JQ5JR12 505 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 JADE1Q6IE81 842 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 SLC39A4Q6P5W5 647 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-227ENST00000485102 FAM160A2Q8N612 972 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-227ENST00000485102 SPPL2BQ8TCT7 592 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 ZFYVE19Q96K21 471 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 REEP2Q9BRK0 252 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 SLC46A2Q9BY10 475 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 ST6GALNAC4Q9H4F1 302 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 C2orf42Q9NWW7 574 aa14.09□□□□□ -0.15
HDAC6-227ENST00000485102 ATG2BQ96BY7 2078 aa14.08□□□□□ -0.15
HDAC6-227ENST00000485102 TRDMT1O14717 391 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms