RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 MTMR4Q9NYA4 1195 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 NYAP2Q9P242 653 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 ZNF70Q9UC06 446 aaPredicted RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 SEC63Q9UGP8 760 aaKnown RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 SAP30BPQ9UHR5 308 aaKnown RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 CDC42EP3Q9UKI2 254 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 STX8Q9UNK0 236 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 MTMR6Q9Y217 621 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 MORC2Q9Y6X9 1032 aaPredicted RBP4.9□□□□□ -1.63
SPTA1-206ENST00000484520 CCDC88AQ3V6T2 1871 aa4.9□□□□□ -1.63
SPTA1-206ENST00000484520 DDX60LQ5H9U9 1706 aaKnown RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 IGKV6D-41A0A0C4DH26 115 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 WNT10BO00744 389 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 RAMP2O60895 175 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 PRDM1O75626 825 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 LARGE1O95461 756 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 ASNSP08243 561 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 CYP2D6P10635 497 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 PTPN1P18031 435 aaKnown RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 SHMT1P34896 483 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 TRAPPC10P48553 1259 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 GMPSP49915 693 aaPredicted RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 CCT2P78371 535 aaKnown RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 HHEXQ03014 270 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 ICA1Q05084 483 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 GNL2Q13823 731 aaKnown RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 ABCB5Q2M3G0 1257 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 SUPT20HL1Q3ZLR7 823 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 DPY19L2P1Q6NXN4 242 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 CHST3Q7LGC8 479 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 GPR135Q8IZ08 494 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 D2HGDHQ8N465 521 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 SMC1BQ8NDV3 1235 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 BICD2Q8TD16 824 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 KCNG4Q8TDN1 519 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 NUP133Q8WUM0 1156 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 LPAR1Q92633 364 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 MKL1Q969V6 931 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 PRMT6Q96LA8 375 aaPredicted RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 SLC26A6Q9BXS9 759 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 FOXP1Q9H334 677 aaPredicted RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 NELFAQ9H3P2 528 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 TDRD3Q9H7E2 651 aaKnown RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 MSL2Q9HCI7 577 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 DDX4Q9NQI0 724 aaKnown RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 ADARB2Q9NS39 739 aaKnown RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 GPRC5DQ9NZD1 345 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 HECAQ9UBI9 543 aaPredicted RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 CNOT7Q9UIV1 285 aaKnown RBP4.89□□□□□ -1.63
SPTA1-206ENST00000484520 GIT1Q9Y2X7 761 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 TAF1P21675 1872 aa4.89□□□□□ -1.63
SPTA1-206ENST00000484520 LAMB1P07942 1786 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 CYP2D7A0A087X1C5 515 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 GOLGA6L4A6NEF3 574 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 CAPN14A8MX76 684 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 MPHOSPH10O00566 681 aaKnown RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 JAK2O60674 1132 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 CTNND1O60716 968 aaKnown RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 PLA2G6O60733 806 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 LETM1O95202 739 aaPredicted RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 CTDNEP1O95476 244 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 YEATS4O95619 227 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 SNHG28P0DPA3 235 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 SCG2P13521 617 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 KRT4P19013 534 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 PTGS1P23219 599 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 GNA11P29992 359 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 USP14P54578 494 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 UBE2HP62256 183 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 ST3GAL1Q11201 340 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 TCP10Q12799 353 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 ORC2Q13416 577 aaPredicted RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 EIF4HQ15056 248 aaKnown RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 PCOLCEQ15113 449 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 PFKFB3Q16875 520 aaPredicted RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 KLHL40Q2TBA0 621 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 RILPL1Q5EBL4 403 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 FAM47AQ5JRC9 791 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 USP50Q70EL3 339 aaPredicted RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 CXXC5Q7LFL8 322 aaKnown RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 FILIP1Q7Z7B0 1213 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 PNMA8AQ86V59 439 aaPredicted RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 TMPRSS6Q8IU80 811 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 OR14K1Q8NGZ2 314 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 RRP36Q96EU6 259 aaKnown RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 DYNLL2Q96FJ2 89 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 CEP95Q96GE4 821 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 CCDC34Q96HJ3 373 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 TMEM176AQ96HP8 235 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 NAP1L4Q99733 375 aaKnown RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 TMEM47Q9BQJ4 181 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 ALG1Q9BT22 464 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 AARSD1Q9BTE6 412 aaKnown RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 TTPALQ9BTX7 342 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 MXD3Q9BW11 206 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 MAF1Q9H063 256 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 VEZTQ9HBM0 779 aa4.88□□□□□ -1.63
SPTA1-206ENST00000484520 NCOA5Q9HCD5 579 aaKnown RBP4.88□□□□□ -1.63
SPTA1-206ENST00000484520 INCENPQ9NQS7 918 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms