RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 YEATS4O95619 227 aa30.64■■■□□ 2.5
HLA-C-207ENST00000484378 HSP90AA1P07900 732 aaKnown RBP30.64■■■□□ 2.5
HLA-C-207ENST00000484378 WNT7BP56706 349 aa30.64■■■□□ 2.5
HLA-C-207ENST00000484378 SEPT5Q99719 369 aaPredicted RBP30.64■■■□□ 2.5
HLA-C-207ENST00000484378 CBWD1Q9BRT8 395 aa30.64■■■□□ 2.5
HLA-C-207ENST00000484378 LRRC3Q9BY71 257 aa30.64■■■□□ 2.5
HLA-C-207ENST00000484378 OSBPL6Q9BZF3 934 aa30.64■■■□□ 2.5
HLA-C-207ENST00000484378 LRRC27Q9C0I9 530 aa30.64■■■□□ 2.5
HLA-C-207ENST00000484378 GPR88Q9GZN0 384 aa30.64■■■□□ 2.5
HLA-C-207ENST00000484378 ZCWPW1Q9H0M4 648 aa30.64■■■□□ 2.5
HLA-C-207ENST00000484378 HSFX1Q9UBD0 423 aa30.64■■■□□ 2.5
HLA-C-207ENST00000484378 MTF2Q9Y483 593 aaPredicted RBP30.64■■■□□ 2.5
HLA-C-207ENST00000484378 GOLGA8IPA6NC78 632 aa30.63■■■□□ 2.49
HLA-C-207ENST00000484378 GOLGA8JA6NMD2 632 aa30.63■■■□□ 2.49
HLA-C-207ENST00000484378 FAM170BA6NMN3 283 aa30.63■■■□□ 2.49
HLA-C-207ENST00000484378 KPNA7A9QM74 516 aa30.63■■■□□ 2.49
HLA-C-207ENST00000484378 PNPLA4P41247 253 aa30.63■■■□□ 2.49
HLA-C-207ENST00000484378 WSCD1Q658N2 575 aa30.63■■■□□ 2.49
HLA-C-207ENST00000484378 VITQ6UXI7 678 aa30.63■■■□□ 2.49
HLA-C-207ENST00000484378 STXBP4Q6ZWJ1 553 aa30.63■■■□□ 2.49
HLA-C-207ENST00000484378 PSMG2Q969U7 264 aa30.63■■■□□ 2.49
HLA-C-207ENST00000484378 CUEDC2Q9H467 287 aa30.63■■■□□ 2.49
HLA-C-207ENST00000484378 RIF1Q5UIP0 2472 aaKnown RBP30.63■■■□□ 2.49
HLA-C-207ENST00000484378 PSMC3P17980 439 aa30.62■■■□□ 2.49
HLA-C-207ENST00000484378 POLR2BP30876 1174 aaKnown RBP30.62■■■□□ 2.49
HLA-C-207ENST00000484378 VIPR2P41587 438 aa30.62■■■□□ 2.49
HLA-C-207ENST00000484378 E2F4Q16254 413 aa30.62■■■□□ 2.49
HLA-C-207ENST00000484378 MGAT5BQ3V5L5 792 aa30.62■■■□□ 2.49
HLA-C-207ENST00000484378 ZNF852Q6ZMS4 543 aa30.62■■■□□ 2.49
HLA-C-207ENST00000484378 ITIH5Q86UX2 942 aa30.62■■■□□ 2.49
HLA-C-207ENST00000484378 CACTINQ8WUQ7 758 aaKnown RBP30.62■■■□□ 2.49
HLA-C-207ENST00000484378 DEPDC1BQ8WUY9 529 aa30.62■■■□□ 2.49
HLA-C-207ENST00000484378 DHX58Q96C10 678 aa30.62■■■□□ 2.49
HLA-C-207ENST00000484378 PCIF1Q9H4Z3 704 aa30.62■■■□□ 2.49
HLA-C-207ENST00000484378 TRPV4Q9HBA0 871 aa30.62■■■□□ 2.49
HLA-C-207ENST00000484378 WDR87Q6ZQQ6 2873 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 EXTL3O43909 919 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 CUTAO60888 179 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 ITGB3P05106 788 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 GDI1P31150 447 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 TUFMP49411 452 aaKnown RBP30.61■■■□□ 2.49
HLA-C-207ENST00000484378 CDR1P51861 262 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 VEPH1Q14D04 833 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 DNAJB7Q7Z6W7 309 aaPredicted RBP30.61■■■□□ 2.49
HLA-C-207ENST00000484378 FAM200AQ8TCP9 573 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 IRF7Q92985 503 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 BORCS6Q96GS4 357 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 KBTBD4Q9NVX7 518 aa30.61■■■□□ 2.49
HLA-C-207ENST00000484378 SPATA6Q9NWH7 488 aaPredicted RBP30.61■■■□□ 2.49
HLA-C-207ENST00000484378 MRPS17Q9Y2R5 130 aaKnown RBP30.61■■■□□ 2.49
HLA-C-207ENST00000484378 FGF19O95750 216 aa30.6■■■□□ 2.49
HLA-C-207ENST00000484378 TARSP26639 723 aaKnown RBP30.6■■■□□ 2.49
HLA-C-207ENST00000484378 ASIC1P78348 528 aa30.6■■■□□ 2.49
HLA-C-207ENST00000484378 FOXD4L6Q3SYB3 417 aaPredicted RBP30.6■■■□□ 2.49
HLA-C-207ENST00000484378 FOXD4L3Q6VB84 417 aaPredicted RBP30.6■■■□□ 2.49
HLA-C-207ENST00000484378 C1orf127Q8N9H9 656 aa30.6■■■□□ 2.49
HLA-C-207ENST00000484378 HPS3Q969F9 1004 aa30.6■■■□□ 2.49
HLA-C-207ENST00000484378 NELL2Q99435 816 aa30.6■■■□□ 2.49
HLA-C-207ENST00000484378 TRIM9Q9C026 710 aa30.6■■■□□ 2.49
HLA-C-207ENST00000484378 ZNF334Q9HCZ1 680 aaPredicted RBP30.6■■■□□ 2.49
HLA-C-207ENST00000484378 AGAP1Q9UPQ3 857 aa30.6■■■□□ 2.49
HLA-C-207ENST00000484378 R4GN57 208 aa30.6■■■□□ 2.49
HLA-C-207ENST00000484378 SP9P0CG40 484 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 MAGEA9P43362 315 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 AMPD3Q01432 767 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 SMARCB1Q12824 385 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 SHC4Q6S5L8 630 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 IQUBQ8NA54 791 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 GLIS3Q8NEA6 775 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 C2orf15Q8WU43 125 aaKnown RBP30.59■■■□□ 2.49
HLA-C-207ENST00000484378 E2F7Q96AV8 911 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 LPIN3Q9BQK8 851 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 ATXN3LQ9H3M9 355 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 ABI2Q9NYB9 513 aaPredicted RBP30.59■■■□□ 2.49
HLA-C-207ENST00000484378 ITGA11Q9UKX5 1188 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 FAM186AA6NE01 2351 aa30.59■■■□□ 2.49
HLA-C-207ENST00000484378 PTPRZ1P23471 2315 aaPredicted RBP30.59■■■□□ 2.49
HLA-C-207ENST00000484378 NCANO14594 1321 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 HEPACAM2A8MVW5 462 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 NCAM2O15394 837 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 ZSCAN22P10073 491 aaPredicted RBP30.58■■■□□ 2.49
HLA-C-207ENST00000484378 PDIA4P13667 645 aaKnown RBP30.58■■■□□ 2.49
HLA-C-207ENST00000484378 GABRR2P28476 465 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 STXBP5Q5T5C0 1151 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 ZC3H14Q6PJT7 736 aaKnown RBP30.58■■■□□ 2.49
HLA-C-207ENST00000484378 GAREM2Q75VX8 874 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 MFSD6LQ8IWD5 586 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 DCP1BQ8IZD4 617 aaKnown RBP30.58■■■□□ 2.49
HLA-C-207ENST00000484378 GPD1LQ8N335 351 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 SPPL2BQ8TCT7 592 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 FAM84AQ96KN4 292 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 PDE11AQ9HCR9 933 aa30.58■■■□□ 2.49
HLA-C-207ENST00000484378 TICRRQ7Z2Z1 1910 aa30.57■■■□□ 2.48
HLA-C-207ENST00000484378 PATJQ8NI35 1801 aa30.57■■■□□ 2.48
HLA-C-207ENST00000484378 COL4A2P08572 1712 aa30.57■■■□□ 2.48
HLA-C-207ENST00000484378 ZNF263O14978 683 aa30.57■■■□□ 2.48
HLA-C-207ENST00000484378 KIAA0391O15091 583 aaKnown RBP30.57■■■□□ 2.48
HLA-C-207ENST00000484378 LAMTOR5O43504 91 aa30.57■■■□□ 2.48
HLA-C-207ENST00000484378 TMEM191BP0C7N4 346 aa30.57■■■□□ 2.48
HLA-C-207ENST00000484378 ATF6P18850 670 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms