RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 SCAMP4Q969E2 229 aa5.81□□□□□ -1.48
SCAF11-207ENST00000484275 SERGEFQ9UGK8 458 aa5.81□□□□□ -1.48
SCAF11-207ENST00000484275 AGAP1Q9UPQ3 857 aa5.81□□□□□ -1.48
SCAF11-207ENST00000484275 SPATA31A3Q5VYP0 1347 aa5.8□□□□□ -1.48
SCAF11-207ENST00000484275 F5H697 171 aa5.8□□□□□ -1.48
SCAF11-207ENST00000484275 GABRDO14764 452 aa5.8□□□□□ -1.48
SCAF11-207ENST00000484275 URI1O94763 535 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-207ENST00000484275 NDUFV1P49821 464 aa5.8□□□□□ -1.48
SCAF11-207ENST00000484275 TOB1P50616 345 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-207ENST00000484275 TAF2Q6P1X5 1199 aa5.8□□□□□ -1.48
SCAF11-207ENST00000484275 SLC4A10Q6U841 1118 aa5.8□□□□□ -1.48
SCAF11-207ENST00000484275 ZNF782Q6ZMW2 699 aaPredicted RBP5.8□□□□□ -1.48
SCAF11-207ENST00000484275 PDSS2Q86YH6 399 aa5.8□□□□□ -1.48
SCAF11-207ENST00000484275 CAMKK1Q8N5S9 505 aa5.8□□□□□ -1.48
SCAF11-207ENST00000484275 AMBRA1Q9C0C7 1298 aa5.8□□□□□ -1.48
SCAF11-207ENST00000484275 NR2E3Q9Y5X4 410 aa5.8□□□□□ -1.48
SCAF11-207ENST00000484275 SETD1BQ9UPS6 1966 aaKnown RBP5.8□□□□□ -1.48
SCAF11-207ENST00000484275 LINC01548A6NM66 108 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 ZNF785A8K8V0 405 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 GCOM1H8Y6P7 765 aaPredicted RBP5.79□□□□□ -1.48
SCAF11-207ENST00000484275 GJB1P08034 283 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 DRD4P21917 467 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 KRT85P78386 507 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 PPP4R3AQ6IN85 833 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 AOPEPQ8N6M6 819 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 PSD4Q8NDX1 1056 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 OSBPL9Q96SU4 736 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 TPSD1Q9BZJ3 242 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 BRD9Q9H8M2 597 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 FLRT1Q9NZU1 646 aa5.79□□□□□ -1.48
SCAF11-207ENST00000484275 CFAP20Q9Y6A4 193 aaKnown RBP5.79□□□□□ -1.48
SCAF11-207ENST00000484275 TTLL1O95922 423 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 JUPP14923 745 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 ITGB6P18564 788 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 CHRM3P20309 590 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 PHKA1P46020 1223 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 CDKN1CP49918 316 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-207ENST00000484275 CCT8P50990 548 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 ZNF135P52742 658 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-207ENST00000484275 SSBP2P81877 361 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-207ENST00000484275 HABP2Q14520 560 aaPredicted RBP5.78□□□□□ -1.48
SCAF11-207ENST00000484275 UAP1L1Q3KQV9 507 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 FAM153CQ494X1 144 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 TMEM119Q4V9L6 283 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 TTC7BQ86TV6 843 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 SEMA6DQ8NFY4 1073 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 FKBP10Q96AY3 582 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 C1orf43Q9BWL3 253 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 ACTRT3Q9BYD9 372 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 GPR35Q9HC97 309 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 SIDT1Q9NXL6 827 aaKnown RBP5.78□□□□□ -1.48
SCAF11-207ENST00000484275 PADI4Q9UM07 663 aa5.78□□□□□ -1.48
SCAF11-207ENST00000484275 SHTN1A0MZ66 631 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 TRIAP1O43715 76 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 VPS4BO75351 444 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 KATNA1O75449 491 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 KIF20AO95235 890 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 HNRNPCP07910 306 aaKnown RBP eCLIP5.77□□□□□ -1.49
SCAF11-207ENST00000484275 EBLN1P0CF75 366 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 ZFXP17010 805 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-207ENST00000484275 CYP2C19P33261 490 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 FXR1P51114 621 aaKnown RBP eCLIP5.77□□□□□ -1.49
SCAF11-207ENST00000484275 ITKQ08881 620 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 TCF15Q12870 199 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 SRSF7Q16629 238 aaKnown RBP eCLIP5.77□□□□□ -1.49
SCAF11-207ENST00000484275 RBM20Q5T481 1227 aaKnown RBP5.77□□□□□ -1.49
SCAF11-207ENST00000484275 VPS53Q5VIR6 699 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 FAM90A1Q86YD7 464 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 FAM109AQ8N4B1 249 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 VGLL2Q8N8G2 317 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 Q8N9P0 234 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-207ENST00000484275 ALG8Q9BVK2 526 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 SERHLQ9NQF3 203 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 SERTAD4Q9NUC0 356 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 RLIMQ9NVW2 624 aa5.77□□□□□ -1.49
SCAF11-207ENST00000484275 TP73O15350 636 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 ZRANB2O95218 330 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCAF11-207ENST00000484275 LATS1O95835 1130 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 PDHA1P08559 390 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 NHLRC4P0CG21 123 aaPredicted RBP5.76□□□□□ -1.49
SCAF11-207ENST00000484275 PRDX5P30044 214 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 GUCY2FP51841 1108 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 ADKP55263 362 aaKnown RBP5.76□□□□□ -1.49
SCAF11-207ENST00000484275 KRTAP10-9P60411 292 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 BOP1Q14137 746 aaKnown RBP5.76□□□□□ -1.49
SCAF11-207ENST00000484275 LLGL1Q15334 1064 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 EZH2Q15910 746 aaKnown RBP5.76□□□□□ -1.49
SCAF11-207ENST00000484275 KIAA1614Q5VZ46 1190 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 PPP1R32Q7Z5V6 425 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 MTMR8Q96EF0 704 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 TMX1Q9H3N1 280 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 SPC25Q9HBM1 224 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 SLAMF7Q9NQ25 335 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 MAN1C1Q9NR34 630 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 EHD3Q9NZN3 535 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 MRFAP1Q9Y605 127 aa5.76□□□□□ -1.49
SCAF11-207ENST00000484275 TARM1B6A8C7 271 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 ZNF213O14771 459 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 GNAI3P08754 354 aa5.75□□□□□ -1.49
SCAF11-207ENST00000484275 CDK11BP21127 795 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms