RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 GABRDO14764 452 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 HUS1O60921 280 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 CST3P01034 146 aaPredicted RBP17.07■□□□□ 0.32
UPF3A-208ENST00000484246 SMARCB1Q12824 385 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 NCOA4Q13772 614 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 ISM2Q6H9L7 571 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 SV2AQ7L0J3 742 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 C12orf76Q8N812 135 aaPredicted RBP17.07■□□□□ 0.32
UPF3A-208ENST00000484246 MLKLQ8NB16 471 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 OR10T2Q8NGX3 314 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 NELFBQ8WX92 580 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 UHRF1Q96T88 793 aaPredicted RBP17.07■□□□□ 0.32
UPF3A-208ENST00000484246 PHF7Q9BWX1 381 aaPredicted RBP17.07■□□□□ 0.32
UPF3A-208ENST00000484246 PRKD2Q9BZL6 878 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 ZCWPW1Q9H0M4 648 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 SNX9Q9Y5X1 595 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 TSC2P49815 1807 aa17.07■□□□□ 0.32
UPF3A-208ENST00000484246 RFPL2O75678 378 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 VNN1O95497 513 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 CPB1P15086 417 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 TRPC3Q13507 836 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 SOWAHAQ2M3V2 549 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 ATAT1Q5SQI0 421 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 TMC5Q6UXY8 1006 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 FILIP1Q7Z7B0 1213 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 ADGRF2Q8IZF7 708 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 THEM5Q8N1Q8 247 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 SLC7A14Q8TBB6 771 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 TAF4BQ92750 862 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 METTL14Q9HCE5 456 aaKnown RBP17.06■□□□□ 0.32
UPF3A-208ENST00000484246 TMEM8AQ9HCN3 771 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 CTNND2Q9UQB3 1225 aa17.06■□□□□ 0.32
UPF3A-208ENST00000484246 CCDC195A0A1B0GUA6 201 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 STX10O60499 249 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 TACC1O75410 805 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 VNN2O95498 520 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 ASS1P00966 412 aaKnown RBP17.05■□□□□ 0.32
UPF3A-208ENST00000484246 SPATA31D3P0C874 917 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 TRIM49P0CI25 452 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 TRIM49CP0CI26 452 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 WARSP23381 471 aaKnown RBP17.05■□□□□ 0.32
UPF3A-208ENST00000484246 LHX1P48742 406 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 MARSP56192 900 aaKnown RBP17.05■□□□□ 0.32
UPF3A-208ENST00000484246 MYL6P60660 151 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 PPP3CAQ08209 521 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 BIRC3Q13489 604 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 PPM1LQ5SGD2 360 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 KLHL10Q6JEL2 608 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 SPATA31D4Q6ZUB0 917 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 FRMD5Q7Z6J6 570 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 C2orf15Q8WU43 125 aaKnown RBP17.05■□□□□ 0.32
UPF3A-208ENST00000484246 KBTBD7Q8WVZ9 684 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 ACBD6Q9BR61 282 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 APOL5Q9BWW9 433 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 POMKQ9H5K3 350 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 RWDD2AQ9UIY3 292 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 USTQ9Y2C2 406 aa17.05■□□□□ 0.32
UPF3A-208ENST00000484246 PLXNA3P51805 1871 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 MTMR11A4FU01 709 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 LOC730098B7Z3J9 87 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 PHACTR2O75167 634 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 GNA14O95837 355 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 PCSK1P29120 753 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 ELF1P32519 619 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 MYL7Q01449 175 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 ZNF699Q32M78 642 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 CT47A1Q5JQC4 288 aaPredicted RBP17.04■□□□□ 0.32
UPF3A-208ENST00000484246 OSTM1Q86WC4 334 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 SMG7Q92540 1137 aaKnown RBP17.04■□□□□ 0.32
UPF3A-208ENST00000484246 EEF2KMTQ96G04 330 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 FAXDC2Q96IV6 333 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 PKMYT1Q99640 499 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 WDR6Q9NNW5 1121 aaKnown RBP17.04■□□□□ 0.32
UPF3A-208ENST00000484246 ARMCX3Q9UH62 379 aaPredicted RBP17.04■□□□□ 0.32
UPF3A-208ENST00000484246 CDH22Q9UJ99 828 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 INSL5Q9Y5Q6 135 aa17.04■□□□□ 0.32
UPF3A-208ENST00000484246 SCN1AP35498 2009 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 TULP1O00294 542 aaPredicted RBP17.03■□□□□ 0.32
UPF3A-208ENST00000484246 PMM2O15305 246 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 XYLBO75191 536 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 SEC24AO95486 1093 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 HLA-DRAP01903 254 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 OR4Q2P0C623 313 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 GCLMP48507 274 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 MXI1P50539 228 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 ARPP19P56211 112 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 TNNC1P63316 161 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 ADCY1Q08828 1119 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 SGSM1Q2NKQ1 1148 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 INTS6LQ5JSJ4 861 aaKnown RBP17.03■□□□□ 0.32
UPF3A-208ENST00000484246 KRT39Q6A163 491 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 RNF19BQ6ZMZ0 732 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 DCP1BQ8IZD4 617 aaKnown RBP17.03■□□□□ 0.32
UPF3A-208ENST00000484246 FEZF2Q8TBJ5 459 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 SLC35C1Q96A29 364 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 TMEM209Q96SK2 561 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 CYP4F11Q9HBI6 524 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 ABCB6Q9NP58 842 aa17.03■□□□□ 0.32
UPF3A-208ENST00000484246 AVENQ9NQS1 362 aaPredicted RBP17.03■□□□□ 0.32
UPF3A-208ENST00000484246 DDX43Q9NXZ2 648 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms