RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 NAT14Q8WUY8 206 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 YME1L1Q96TA2 773 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 CARD14Q9BXL6 1004 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 RHOBTB2Q9BYZ6 727 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 WDR70Q9NW82 654 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 CCNKO75909 580 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 SEC24AO95486 1093 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 USF2Q15853 346 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 TDRKHQ9Y2W6 561 aaKnown RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 CLDN3O15551 220 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 GTF2H1P32780 548 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 IL5RAQ01344 420 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 STX5Q13190 355 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 MZT2BQ6NZ67 158 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 MTHFD1LQ6UB35 978 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 UNC13DQ70J99 1090 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 SYTL5Q8TDW5 730 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 IP6K2Q9UHH9 426 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 MYH3P11055 1940 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 TNFAIP2Q03169 654 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 TOB2Q14106 344 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 DRAP1Q14919 205 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 NAB2Q15742 525 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 FUT11Q495W5 492 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 ECSITQ9BQ95 431 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 KLHL33A6NCF5 533 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 FOSP01100 380 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 FGFR3P22607 806 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 STARP49675 285 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 KPNA1P52294 538 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 PPP1R15BQ5SWA1 713 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 ATXN2LQ8WWM7 1075 aaKnown RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 GLG1Q92896 1179 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 CASS4Q9NQ75 786 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 GIN1Q9NXP7 522 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 RAB21Q9UL25 225 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 CD58P19256 250 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 MMRN1Q13201 1228 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 MAPK6Q16659 721 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 ATP13A5Q4VNC0 1218 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 BEST2Q8NFU1 509 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 MAGEC3Q8TD91 643 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 E2F8A0AVK6 867 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 TK2O00142 265 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 MEIS1O00470 390 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 DDR2Q16832 855 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 DGKKQ5KSL6 1271 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 LCORLQ8N3X6 602 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 MNTQ99583 582 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 PTGES3LE9PB15 166 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 GSSP48637 474 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 FMR1Q06787 632 aaKnown RBP eCLIP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 SMU1Q2TAY7 513 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 EGFLAMQ63HQ2 1017 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 HTRA1Q92743 480 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 FAM149B1Q96BN6 582 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 EAF2Q96CJ1 260 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-207ENST00000483888 TRAPPC8Q9Y2L5 1435 aa10.68□□□□□ -0.7
COL12A1-207ENST00000483888 ADAMTS2O95450 1211 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 CBX6O95503 412 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 ABL1P00519 1130 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 SNRPAP09012 282 aaKnown RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 ATP6V1B2P21281 511 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 BBS7Q8IWZ6 715 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 METTL13Q8N6R0 699 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 DRAXINQ8NBI3 349 aaPredicted RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 EYA3Q99504 573 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 ZC3H7BQ9UGR2 993 aaKnown RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 PFDN2Q9UHV9 154 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 GRID1Q9ULK0 1009 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 FAM20BO75063 409 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 FLT3P36888 993 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 SERPINB9P50453 376 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 AQP5P55064 265 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 TYSND1Q2T9J0 566 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 BBS5Q8N3I7 341 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 SDR42E1Q8WUS8 393 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 WRNIP1Q96S55 665 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 MOV10Q9HCE1 1003 aaKnown RBP10.67□□□□□ -0.7
COL12A1-207ENST00000483888 DOLKQ9UPQ8 538 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 PMF1-BGLAPU3KQ54 211 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 CLOCKO15516 846 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 EPN2O95208 641 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 ARIH2O95376 493 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 APRTP07741 180 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 CASP4P49662 377 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 ZNF285Q96NJ3 590 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 FOXP3Q9BZS1 431 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 EFCAB10A6NFE3 127 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 AGRPO00253 132 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 GUCA1CO95843 209 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 CCNA2P20248 432 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 NLRX1Q86UT6 975 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 PLEKHA8Q96JA3 519 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 KIAA1683Q9H0B3 1180 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 GGA1Q9UJY5 639 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 ARHGEF11O15085 1522 aa10.67□□□□□ -0.7
COL12A1-207ENST00000483888 CLCN2P51788 898 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms