RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 HMGXB4Q9UGU5 601 aa20.27■□□□□ 0.84
PCCB-216ENST00000483687 INSL6Q9Y581 213 aa20.27■□□□□ 0.84
PCCB-216ENST00000483687 ARHGEF37A1IGU5 675 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 M0QZQ0 153 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 ARHGAP6O43182 974 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 TRAPPC3O43617 180 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 CYP11B1P15538 503 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 EIF4A3P38919 411 aaKnown RBP20.27■□□□□ 0.83
PCCB-216ENST00000483687 C9orf50Q5SZB4 431 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 RASIP1Q5U651 963 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 TMEM86AQ8N2M4 240 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 EPS8L1Q8TE68 723 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 WHAMMQ8TF30 809 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 CCDC42Q96M95 316 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 SNX25Q9H3E2 840 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 MARCH5Q9NX47 278 aa20.27■□□□□ 0.83
PCCB-216ENST00000483687 TIMM13Q9Y5L4 95 aaPredicted RBP20.27■□□□□ 0.83
PCCB-216ENST00000483687 MRPL42Q9Y6G3 142 aaKnown RBP20.27■□□□□ 0.83
PCCB-216ENST00000483687 TSC2P49815 1807 aa20.26■□□□□ 0.83
PCCB-216ENST00000483687 SSU72P8A0A1W2PR75 194 aa20.26■□□□□ 0.83
PCCB-216ENST00000483687 GNA15P30679 374 aa20.26■□□□□ 0.83
PCCB-216ENST00000483687 GNL1P36915 607 aaPredicted RBP20.26■□□□□ 0.83
PCCB-216ENST00000483687 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
PCCB-216ENST00000483687 ORC1Q13415 861 aa20.26■□□□□ 0.83
PCCB-216ENST00000483687 ZNF571Q7Z3V5 609 aaPredicted RBP20.26■□□□□ 0.83
PCCB-216ENST00000483687 RNPC3Q96LT9 517 aaKnown RBP20.26■□□□□ 0.83
PCCB-216ENST00000483687 TWNKQ96RR1 684 aa20.26■□□□□ 0.83
PCCB-216ENST00000483687 NT5C1AQ9BXI3 368 aa20.26■□□□□ 0.83
PCCB-216ENST00000483687 PUF60Q9UHX1 559 aaKnown RBP20.26■□□□□ 0.83
PCCB-216ENST00000483687 DSEQ9UL01 958 aa20.26■□□□□ 0.83
PCCB-216ENST00000483687 KIAA1671Q9BY89 1806 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 A8MXQ7 604 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 TLL1O43897 1013 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 CALCAP01258 141 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 FAM163BP0C2L3 166 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 WARSP23381 471 aaKnown RBP20.25■□□□□ 0.83
PCCB-216ENST00000483687 RAD23BP54727 409 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 MTF1Q14872 753 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 KCNT2Q6UVM3 1135 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 NOP9Q86U38 636 aaKnown RBP20.25■□□□□ 0.83
PCCB-216ENST00000483687 UNC93AQ86WB7 457 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 TMEM173Q86WV6 379 aaPredicted RBP20.25■□□□□ 0.83
PCCB-216ENST00000483687 SLC20A1Q8WUM9 679 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 TMEM176AQ96HP8 235 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 RAD9AQ99638 391 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.25■□□□□ 0.83
PCCB-216ENST00000483687 ELOVL4Q9GZR5 314 aa20.25■□□□□ 0.83
PCCB-216ENST00000483687 PAEPP09466 180 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 LAG3P18627 525 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 TAF3Q5VWG9 929 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 RAD9BQ6WBX8 426 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 VPS36Q86VN1 386 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 METTL23Q86XA0 190 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 CCDC170Q8IYT3 715 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 FIBCD1Q8N539 461 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 SLC4A11Q8NBS3 891 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 ZNF558Q96NG5 402 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 NOCTQ9UK39 431 aaKnown RBP20.24■□□□□ 0.83
PCCB-216ENST00000483687 PCDHB8Q9UN66 801 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 STXBP5LQ9Y2K9 1186 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 NME7Q9Y5B8 376 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 SF3B1O75533 1304 aaKnown RBP eCLIP20.24■□□□□ 0.832e-6■■■■■ 109.7
PCCB-216ENST00000483687 RANBP2P49792 3224 aaKnown RBP20.24■□□□□ 0.83
PCCB-216ENST00000483687 GABRDO14764 452 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 THAP12O43422 761 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 AKR1B10O60218 316 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 CYP11A1P05108 521 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 PDGFRBP09619 1106 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 LMO2P25791 158 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 CYLC1P35663 651 aaPredicted RBP20.24■□□□□ 0.83
PCCB-216ENST00000483687 LHX1P48742 406 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 KIF11P52732 1056 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 SHHQ15465 462 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 FUT10Q6P4F1 479 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 OSTM1Q86WC4 334 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 AGPAT1Q99943 283 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 DDX43Q9NXZ2 648 aaKnown RBP20.24■□□□□ 0.83
PCCB-216ENST00000483687 ADAMTS1Q9UHI8 967 aa20.24■□□□□ 0.83
PCCB-216ENST00000483687 VWA8A3KMH1 1905 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 CARNS1A5YM72 827 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 HCRTO43612 131 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 CD19P15391 556 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 TYMPP19971 482 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 ELAVL2Q12926 359 aaKnown RBP20.23■□□□□ 0.83
PCCB-216ENST00000483687 ZNF677Q86XU0 584 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 COLGALT1Q8NBJ5 622 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 SPATA18Q8TC71 538 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 BCL7CQ8WUZ0 217 aaPredicted RBP20.23■□□□□ 0.83
PCCB-216ENST00000483687 IGSF21Q96ID5 467 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 HEXIM2Q96MH2 286 aaKnown RBP20.23■□□□□ 0.83
PCCB-216ENST00000483687 GPR62Q9BZJ7 368 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 DNAI2Q9GZS0 605 aa20.23■□□□□ 0.83
PCCB-216ENST00000483687 SEPT11Q9NVA2 429 aaKnown RBP20.23■□□□□ 0.83
PCCB-216ENST00000483687 EPN1Q9Y6I3 576 aaPredicted RBP20.23■□□□□ 0.83
PCCB-216ENST00000483687 SYN3O14994 580 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 NDUFA10O95299 355 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 MMEP08473 750 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 TNFAIP3P21580 790 aa20.22■□□□□ 0.83
PCCB-216ENST00000483687 BRD2P25440 801 aaKnown RBP20.22■□□□□ 0.83
PCCB-216ENST00000483687 TKTP29401 623 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms