RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 ATF7P17544 494 aaPredicted RBP12.65□□□□□ -0.38
SND1-210ENST00000483503 CYP2C19P33261 490 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 HSPA9P38646 679 aaKnown RBP12.65□□□□□ -0.38
SND1-210ENST00000483503 MARCKSL1P49006 195 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 GSCP56915 257 aaPredicted RBP12.65□□□□□ -0.38
SND1-210ENST00000483503 ADAM17P78536 824 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 PIGHQ14442 188 aaPredicted RBP12.65□□□□□ -0.38
SND1-210ENST00000483503 TERF2Q15554 542 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 CFAP58Q5T655 872 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 MFSD14CQ5VZR4 134 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 DCUN1D2Q6PH85 259 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 SYDE1Q6ZW31 735 aaPredicted RBP12.65□□□□□ -0.38
SND1-210ENST00000483503 KATNAL2Q8IYT4 538 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 C1orf131Q8NDD1 294 aaKnown RBP12.65□□□□□ -0.38
SND1-210ENST00000483503 GRK7Q8WTQ7 553 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 TMEM176AQ96HP8 235 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 RBM41Q96IZ5 413 aaKnown RBP12.65□□□□□ -0.38
SND1-210ENST00000483503 ERP44Q9BS26 406 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
SND1-210ENST00000483503 SPC25Q9HBM1 224 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 BARX2Q9UMQ3 279 aaPredicted RBP12.65□□□□□ -0.38
SND1-210ENST00000483503 POLIQ9UNA4 740 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 TLL2Q9Y6L7 1015 aa12.65□□□□□ -0.38
SND1-210ENST00000483503 ESYT3A0FGR9 886 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 FAM170AA1A519 330 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 TMEM191CA6NGB0 347 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 CA12O43570 354 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 DUSP11O75319 330 aaKnown RBP12.64□□□□□ -0.39
SND1-210ENST00000483503 ALDH1A1P00352 501 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 IGHA2P01877 340 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 HMGCRP04035 888 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 CFHP08603 1231 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 COILP38432 576 aaPredicted RBP12.64□□□□□ -0.39
SND1-210ENST00000483503 TM4SF4P48230 202 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 CRYBB1P53674 252 aaPredicted RBP12.64□□□□□ -0.39
SND1-210ENST00000483503 RAD23BP54727 409 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 FCGRTP55899 365 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 SNX16P57768 344 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 PTPN11Q06124 597 aaPredicted RBP12.64□□□□□ -0.39
SND1-210ENST00000483503 INCA1Q0VD86 236 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 ZNF268Q14587 947 aaPredicted RBP12.64□□□□□ -0.39
SND1-210ENST00000483503 CNGA2Q16280 664 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 FSCN1Q16658 493 aaKnown RBP12.64□□□□□ -0.39
SND1-210ENST00000483503 ZNF394Q53GI3 561 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 SGO2Q562F6 1265 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 SPDYCQ5MJ68 293 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 TAF2Q6P1X5 1199 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 LRIG3Q6UXM1 1119 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 RSPH3Q86UC2 560 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 RCOR2Q8IZ40 523 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 LRRC52Q8N7C0 313 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 C7orf31Q8N865 590 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 PRELID2Q8N945 189 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 C3orf20Q8ND61 904 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 EXD1Q8NHP7 514 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 CXorf38Q8TB03 319 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 HHIPL1Q96JK4 782 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 SNX27Q96L92 541 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 LRRC19Q9H756 370 aa12.64□□□□□ -0.39
SND1-210ENST00000483503 DDX56Q9NY93 547 aaKnown RBP12.64□□□□□ -0.39
SND1-210ENST00000483503 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.64□□□□□ -0.39
SND1-210ENST00000483503 PASKQ96RG2 1323 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 RALGAPA2Q2PPJ7 1873 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 CITO14578 2027 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 CD4P01730 458 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 HOXA11P31270 313 aaPredicted RBP12.63□□□□□ -0.39
SND1-210ENST00000483503 GGCXP38435 758 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 COPS2P61201 443 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 CCL14Q16627 93 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 ODF2Q5BJF6 829 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 DUPD1Q68J44 220 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 CCDC137Q6PK04 289 aaKnown RBP12.63□□□□□ -0.39
SND1-210ENST00000483503 RUFY4Q6ZNE9 571 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 ADAT2Q7Z6V5 191 aaKnown RBP12.63□□□□□ -0.39
SND1-210ENST00000483503 JAMLQ86YT9 394 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 CCDC105Q8IYK2 499 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 NIPA2Q8N8Q9 360 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 SLC4A11Q8NBS3 891 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 DNAJB3Q8WWF6 145 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 TFAP2BQ92481 460 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 SLCO2A1Q92959 643 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 EXOC4Q96A65 974 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 C18orf8Q96DM3 657 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 DDX27Q96GQ7 796 aaKnown RBP12.63□□□□□ -0.39
SND1-210ENST00000483503 GDAP1L1Q96MZ0 367 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 OSMRQ99650 979 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 HINFPQ9BQA5 517 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 MTG1Q9BT17 334 aaPredicted RBP12.63□□□□□ -0.39
SND1-210ENST00000483503 NT5C1AQ9BXI3 368 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 SMYD3Q9H7B4 428 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 SYNCQ9H7C4 482 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 PSD3Q9NYI0 1048 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 CNTN3Q9P232 1028 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 VPS18Q9P253 973 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 UBQLN1Q9UMX0 589 aaKnown RBP12.63□□□□□ -0.39
SND1-210ENST00000483503 GINS2Q9Y248 185 aa12.63□□□□□ -0.39
SND1-210ENST00000483503 TCRBV5S1A1TA0A578 114 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 ZSCAN5CA6NGD5 496 aaPredicted RBP12.62□□□□□ -0.39
SND1-210ENST00000483503 SIGLEC16A6NMB1 481 aa12.62□□□□□ -0.39
SND1-210ENST00000483503 M0QZ92 97 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms