RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TEX28O15482 410 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 ADAM12O43184 909 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 LILRB3O75022 631 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 CYP11A1P05108 521 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 OR4Q2P0C623 313 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 CD58P19256 250 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 ACAT1P24752 427 aaKnown RBP19.1■□□□□ 0.65
CPNE1-224ENST00000483359 FKBP15Q5T1M5 1219 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 TRIM65Q6PJ69 517 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 PPM1KQ8N3J5 372 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 EHBP1Q8NDI1 1231 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 RBSNQ9H1K0 784 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 DDX43Q9NXZ2 648 aaKnown RBP19.1■□□□□ 0.65
CPNE1-224ENST00000483359 MTRRQ9UBK8 725 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 FBXL5Q9UKA1 691 aa19.1■□□□□ 0.65
CPNE1-224ENST00000483359 LGALS16A8MUM7 142 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 GTF2F1P35269 517 aaKnown RBP eCLIP19.09■□□□□ 0.656e-10■■■□□ 14.7
CPNE1-224ENST00000483359 NRIP1P48552 1158 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 UBXN1Q04323 297 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 TCEAL5Q5H9L2 206 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 RRAGAQ7L523 313 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 ARHGEF19Q8IW93 802 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 OR6B3Q8NGW1 331 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 OR10T2Q8NGX3 314 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 NT5C1BQ96P26 610 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 TMEM209Q96SK2 561 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 CLSTN3Q9BQT9 956 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 ANP32EQ9BTT0 268 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 NSUN3Q9H649 340 aaKnown RBP19.09■□□□□ 0.65
CPNE1-224ENST00000483359 IGFLR1Q9H665 355 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 SSX2IPQ9Y2D8 614 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 IRAK3Q9Y616 596 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 XIRP2A4UGR9 3374 aa19.09■□□□□ 0.65
CPNE1-224ENST00000483359 OAZ2O95190 189 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 PON1P27169 355 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 OR1D2P34982 312 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 KLK7P49862 253 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 FANCCQ00597 558 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 MRPL58Q14197 206 aaKnown RBP19.08■□□□□ 0.65
CPNE1-224ENST00000483359 PDE12Q6L8Q7 609 aaKnown RBP19.08■□□□□ 0.65
CPNE1-224ENST00000483359 PDXDC1Q6P996 788 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 GJB7Q6PEY0 223 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 TMEM86AQ8N2M4 240 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 KAT5Q92993 513 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 KLHL5Q96PQ7 755 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 RTP3Q9BQQ7 232 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 EMILIN2Q9BXX0 1053 aa19.08■□□□□ 0.65
CPNE1-224ENST00000483359 GTPBP10A4D1E9 387 aaKnown RBP19.08■□□□□ 0.64
CPNE1-224ENST00000483359 LRRC10BA6NIK2 292 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 H7C4K7 107 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 PDGFRBP09619 1106 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 CPB1P15086 417 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 LMO2P25791 158 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 KLRC2P26717 231 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 PLCB2Q00722 1185 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 KCNMA1Q12791 1236 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 ORC1Q13415 861 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 CCDC85BQ15834 202 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-224ENST00000483359 DPH6Q7L8W6 267 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 PALB2Q86YC2 1186 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 PPM1EQ8WY54 764 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 NAP1L5Q96NT1 182 aaPredicted RBP19.08■□□□□ 0.64
CPNE1-224ENST00000483359 SNX25Q9H3E2 840 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 TLE6Q9H808 572 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.08■□□□□ 0.64
CPNE1-224ENST00000483359 HMGXB4Q9UGU5 601 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 NME7Q9Y5B8 376 aa19.08■□□□□ 0.64
CPNE1-224ENST00000483359 TEX33O43247 280 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 NDUFV1P49821 464 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 PSMC1P62191 440 aaKnown RBP19.07■□□□□ 0.64
CPNE1-224ENST00000483359 RBM10P98175 930 aaKnown RBP19.07■□□□□ 0.64
CPNE1-224ENST00000483359 CUL2Q13617 745 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 CCDC142Q17RM4 750 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 PHLDB3Q6NSJ2 640 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 LLGL2Q6P1M3 1020 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 LIMS2Q7Z4I7 341 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 THEM5Q8N1Q8 247 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 LSM14BQ9BX40 385 aaKnown RBP19.07■□□□□ 0.64
CPNE1-224ENST00000483359 BCO2Q9BYV7 579 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 RXFP1Q9HBX9 757 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 LMCD1Q9NZU5 365 aa19.07■□□□□ 0.64
CPNE1-224ENST00000483359 A8MXQ7 604 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 TACC1O75410 805 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 ADH1AP07327 375 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 CREMQ03060 361 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 FILIP1LQ4L180 1135 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 PPP2R3CQ969Q6 453 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 PCMTD1Q96MG8 357 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-224ENST00000483359 DPEP3Q9H4B8 488 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 BACE2Q9Y5Z0 518 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 GABRDO14764 452 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 SPATA31D3P0C874 917 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 WARSP23381 471 aaKnown RBP19.06■□□□□ 0.64
CPNE1-224ENST00000483359 GNL1P36915 607 aaPredicted RBP19.06■□□□□ 0.64
CPNE1-224ENST00000483359 LHX1P48742 406 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 ROR1Q01973 937 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 SYCP1Q15431 976 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 ZNF394Q53GI3 561 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 SPATA31D4Q6ZUB0 917 aa19.06■□□□□ 0.64
CPNE1-224ENST00000483359 PGLYRP2Q96PD5 576 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms