RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 ABTB1Q969K4 478 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 OXNAD1Q96HP4 312 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 SUDS3Q9H7L9 328 aaPredicted RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 GTF3C4Q9UKN8 822 aa12.45□□□□□ -0.42
VTI1A-205ENST00000483122 MTO1Q9Y2Z2 717 aaKnown RBP12.45□□□□□ -0.42
VTI1A-205ENST00000483122 CYP26A1O43174 497 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 SLC26A4O43511 780 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 FAM13AO94988 1023 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 PGM3O95394 542 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 DLDP09622 509 aaKnown RBP12.44□□□□□ -0.42
VTI1A-205ENST00000483122 ZSCAN5DPP0CG00 497 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 MYL2P10916 166 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 GZMAP12544 262 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 ACTR3P61158 418 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 BFSP1Q12934 665 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 RASA2Q15283 850 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 PRR16Q569H4 304 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 PPP1R18Q6NYC8 613 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 DUS1LQ6P1R4 473 aaKnown RBP12.44□□□□□ -0.42
VTI1A-205ENST00000483122 ULK2Q8IYT8 1036 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 THTPAQ9BU02 230 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 OLFML3Q9NRN5 406 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 AGPAT3Q9NRZ7 376 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 DMAC2Q9NW81 257 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 PSMC3IPQ9P2W1 217 aaPredicted RBP12.44□□□□□ -0.42
VTI1A-205ENST00000483122 SLC7A8Q9UHI5 535 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 ANAPC7Q9UJX3 599 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 PLA2G4CQ9UP65 541 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 ZNF652Q9Y2D9 606 aa12.44□□□□□ -0.42
VTI1A-205ENST00000483122 ZNFX1Q9P2E3 1918 aaKnown RBP12.44□□□□□ -0.42
VTI1A-205ENST00000483122 EIF3DO15371 548 aaKnown RBP eCLIP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 CIB2O75838 187 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 LDHBP07195 334 aaKnown RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 ETS1P14921 441 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 ABCD1P33897 745 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 NOP14P78316 857 aaKnown RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 PDIA2Q13087 525 aaKnown RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 MTA1Q13330 715 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 GRM2Q14416 872 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 TRMT5Q32P41 509 aaKnown RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 ASPRV1Q53RT3 343 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 SH2D4BQ5SQS7 431 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 LPCAT4Q643R3 524 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 RINT1Q6NUQ1 792 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 SMIM5Q71RC9 77 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 GSTA5Q7RTV2 222 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 ETNPPLQ8TBG4 499 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 SNRNP27Q8WVK2 155 aaKnown RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 FHDC1Q9C0D6 1143 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 ZNF287Q9HBT7 754 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 UVRAGQ9P2Y5 699 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 CIDEBQ9UHD4 219 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 ATRNL1Q5VV63 1379 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 FAM237BA0A1B0GVD1 139 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 SMIM31A0A1B0GVY4 71 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 USP17L10C9JJH3 530 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 E5RJQ4 531 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 TULP1O00294 542 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 EML1O00423 815 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 VILLO15195 856 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 RAD21O60216 631 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 TM7SF2O76062 418 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 BMP3P12645 472 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 SH3BGRP55822 239 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 CENPCQ03188 943 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 PPP3CAQ08209 521 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 DLG1Q12959 904 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 KLF1Q13351 362 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 MED21Q13503 144 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 NFIL3Q16649 462 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 C1orf146Q5VVC0 180 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 CCDC174Q6PII3 467 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 CLEC4GQ6UXB4 293 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 RNF111Q6ZNA4 994 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 TMPRSS6Q8IU80 811 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 ZBED8Q8IZ13 594 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 ERMNQ8TAM6 284 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 NAP1L4Q99733 375 aaKnown RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 POLR3CQ9BUI4 534 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 ANO3Q9BYT9 981 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 RANBP17Q9H2T7 1088 aaKnown RBP12.43□□□□□ -0.42
VTI1A-205ENST00000483122 RABGAP1Q9Y3P9 1069 aa12.43□□□□□ -0.42
VTI1A-205ENST00000483122 ZBTB39O15060 712 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 MAGEB3O15480 346 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 STK10O94804 968 aaKnown RBP12.42□□□□□ -0.42
VTI1A-205ENST00000483122 CALCAP01258 141 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 FDX1P10109 184 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 PIM1P11309 404 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-205ENST00000483122 UQCRBP14927 111 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 RFX1P22670 979 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 MAPK4P31152 587 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 GCLMP48507 274 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 AQP4P55087 323 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 DLGAP5Q15398 846 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 C6orf163Q5TEZ5 329 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 LLGL2Q6P1M3 1020 aa12.42□□□□□ -0.42
VTI1A-205ENST00000483122 RBM44Q6ZP01 1051 aaKnown RBP12.42□□□□□ -0.42
VTI1A-205ENST00000483122 ANKMY2Q8IV38 441 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms