RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 CWH43Q9H720 699 aa16.05■□□□□ 0.16
PHGDH-205ENST00000482968 PUF60Q9UHX1 559 aaKnown RBP16.05■□□□□ 0.16
PHGDH-205ENST00000482968 AKR1B10O60218 316 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 TACC1O75410 805 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 PDGFRBP09619 1106 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 GNL1P36915 607 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-205ENST00000482968 MAGEA10P43363 369 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-205ENST00000482968 PDE6CP51160 858 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 RAD23BP54727 409 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 BPIFB4P59827 614 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 INCA1Q0VD86 236 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 TAF3Q5VWG9 929 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 LIMS2Q7Z4I7 341 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 NOP9Q86U38 636 aaKnown RBP16.04■□□□□ 0.16
PHGDH-205ENST00000482968 ADGRF2Q8IZF7 708 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 EPS8L1Q8TE68 723 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 SLC20A1Q8WUM9 679 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 KBTBD7Q8WVZ9 684 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 TMEM175Q9BSA9 504 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 ELOVL4Q9GZR5 314 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 SNX25Q9H3E2 840 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 RC3H2Q9HBD1 1191 aaKnown RBP16.04■□□□□ 0.16
PHGDH-205ENST00000482968 ADAMTS1Q9UHI8 967 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 PYCARDQ9ULZ3 195 aa16.04■□□□□ 0.16
PHGDH-205ENST00000482968 EPN1Q9Y6I3 576 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-205ENST00000482968 SSU72P8A0A1W2PR75 194 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 A8MXQ7 604 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 TMEM189-UBE2V1I3L0A0 370 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 HCRTO43612 131 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 PAX3P23760 479 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 LMO2P25791 158 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 GNA15P30679 374 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 ZNF132P52740 706 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 MAPK8IP2Q13387 824 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 CMTR2Q8IYT2 770 aaKnown RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 CCDC170Q8IYT3 715 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 TTC39CQ8N584 583 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 SLC4A11Q8NBS3 891 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 TMEM176AQ96HP8 235 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 SUSD3Q96L08 255 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 AGPAT1Q99943 283 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 NT5C1AQ9BXI3 368 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 MTIF3Q9H2K0 278 aaKnown RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 SPTLC3Q9NUV7 552 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 ADAM28Q9UKQ2 775 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 NME7Q9Y5B8 376 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 COL4A6Q14031 1691 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 M0QZQ0 153 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 MMEP08473 750 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 ODC1P11926 461 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 ATP2A2P16615 1042 aaKnown RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 TNFAIP3P21580 790 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 SSTR3P32745 418 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 CYLC1P35663 651 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 KIF11P52732 1056 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 ASTE1Q2TB18 679 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 C9orf50Q5SZB4 431 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 HERC6Q8IVU3 1022 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 HEXIM2Q96MH2 286 aaKnown RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 SLC9A7Q96T83 725 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 FAM124BQ9H5Z6 455 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 SEPT11Q9NVA2 429 aaKnown RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 MARCH5Q9NX47 278 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 NOCTQ9UK39 431 aaKnown RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 INSL6Q9Y581 213 aa16.03■□□□□ 0.16
PHGDH-205ENST00000482968 MRPL42Q9Y6G3 142 aaKnown RBP16.03■□□□□ 0.16
PHGDH-205ENST00000482968 A0A087X0T9 212 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 THAP12O43422 761 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 TRAPPC3O43617 180 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 NDUFA10O95299 355 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 FAM228BP0C875 321 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 CD19P15391 556 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 WARSP23381 471 aaKnown RBP16.02■□□□□ 0.15
PHGDH-205ENST00000482968 HTRA4P83105 476 aaPredicted RBP16.02■□□□□ 0.15
PHGDH-205ENST00000482968 GFPT1Q06210 699 aaPredicted RBP16.02■□□□□ 0.15
PHGDH-205ENST00000482968 KCNT2Q6UVM3 1135 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 TOGARAM2Q6ZUX3 1019 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 ACOT1Q86TX2 421 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 VPS36Q86VN1 386 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 UNC93AQ86WB7 457 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 OSTM1Q86WC4 334 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 TMEM173Q86WV6 379 aaPredicted RBP16.02■□□□□ 0.15
PHGDH-205ENST00000482968 GLYCTKQ8IVS8 523 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 TMEM86AQ8N2M4 240 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 PHOSPHO2Q8TCD6 241 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 ZNF606Q8WXB4 792 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 DDX1Q92499 740 aaKnown RBP16.02■□□□□ 0.15
PHGDH-205ENST00000482968 DESI2Q9BSY9 194 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 STXBP5LQ9Y2K9 1186 aa16.02■□□□□ 0.15
PHGDH-205ENST00000482968 FAM170AA1A519 330 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 GABRDO14764 452 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 PAEPP09466 180 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 FAM163BP0C2L3 166 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 CHRNB2P17787 502 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 BRD2P25440 801 aaKnown RBP16.01■□□□□ 0.15
PHGDH-205ENST00000482968 CDR2Q01850 454 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 CYP27A1Q02318 531 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 SHHQ15465 462 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 METTL23Q86XA0 190 aa16.01■□□□□ 0.15
PHGDH-205ENST00000482968 CEP57Q86XR8 500 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms