RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 MAP3K7O43318 606 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 ASTN2O75129 1339 aaPredicted RBP13.1□□□□□ -0.31
CCDC78-213ENST00000482878 TJP3O95049 919 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 CCNB1P14635 433 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 CCNFP41002 786 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 TMEM63BQ5T3F8 832 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 SV2AQ7L0J3 742 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 SRRM1Q8IYB3 904 aaKnown RBP13.1□□□□□ -0.31
CCDC78-213ENST00000482878 TRAIPQ9BWF2 469 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 HERC5Q9UII4 1024 aaKnown RBP13.1□□□□□ -0.31
CCDC78-213ENST00000482878 ATP5HO75947 161 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 GAS8O95995 478 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 UNGP13051 313 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-213ENST00000482878 HSD17B4P51659 736 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 TKFCQ3LXA3 575 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 MCOLN2Q8IZK6 566 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 TMEM161BQ8NDZ6 487 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 C9orf72Q96LT7 481 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 PDP2Q9P2J9 529 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 PHF24Q9UPV7 400 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 NEU2Q9Y3R4 380 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
CCDC78-213ENST00000482878 RALAP11233 206 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 MCCD1P59942 119 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-213ENST00000482878 MRPS9P82933 396 aaKnown RBP13.09□□□□□ -0.31
CCDC78-213ENST00000482878 TMEM62Q0P6H9 643 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 PARP6Q2NL67 630 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 CFAP157Q5JU67 520 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 CCDC97Q96F63 343 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-213ENST00000482878 LRMDAQ9H2I8 198 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 SCN9AQ15858 1988 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 OPHN1O60890 802 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 TCEA3O75764 348 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 LMNAP02545 664 aaKnown RBP13.09□□□□□ -0.31
CCDC78-213ENST00000482878 SKIV2L2P42285 1042 aaKnown RBP13.09□□□□□ -0.31
CCDC78-213ENST00000482878 SNRPFP62306 86 aaKnown RBP13.09□□□□□ -0.31
CCDC78-213ENST00000482878 TMED1Q13445 227 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 SLC39A4Q6P5W5 647 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 SYDE1Q6ZW31 735 aaPredicted RBP13.09□□□□□ -0.31
CCDC78-213ENST00000482878 CCPG1Q9ULG6 757 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 MYH11P35749 1972 aa13.09□□□□□ -0.31
CCDC78-213ENST00000482878 CCDC160A6NGH7 325 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 ZNF189O75820 626 aaPredicted RBP13.08□□□□□ -0.31
CCDC78-213ENST00000482878 KRT36O76013 467 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 NPTX2P47972 431 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 SOX10P56693 466 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 KLF1Q13351 362 aaPredicted RBP13.08□□□□□ -0.31
CCDC78-213ENST00000482878 MAP7Q14244 749 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.08□□□□□ -0.31
CCDC78-213ENST00000482878 KHDC1Q4VXA5 237 aaKnown RBP13.08□□□□□ -0.31
CCDC78-213ENST00000482878 ANKS1BQ7Z6G8 1248 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 ARHGAP18Q8N392 663 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 GRK7Q8WTQ7 553 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 MCUR1Q96AQ8 359 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 IWS1Q96ST2 819 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 CENPKQ9BS16 269 aa13.08□□□□□ -0.31
CCDC78-213ENST00000482878 ZNF536O15090 1300 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 MYPNQ86TC9 1320 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 DENND3A2RUS2 1198 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 LYPLA2O95372 231 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 OATP04181 439 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 MARK3P27448 753 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 FOXN2P32314 431 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 XKR9Q5GH70 373 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 WASHC2DQ5SRD0 308 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 MAP4K3Q8IVH8 894 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 MAGEB18Q96M61 343 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 LGALS13Q9UHV8 139 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 ADGRA3Q8IWK6 1321 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 TESPA1A2RU30 521 aaPredicted RBP13.08□□□□□ -0.32
CCDC78-213ENST00000482878 TAC1P20366 129 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 MAN1A1P33908 653 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 PSMC4P43686 418 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 CAV1Q03135 178 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 DNAJC3Q13217 504 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 MTMR1Q13613 665 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 RNF43Q68DV7 783 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 SCYL3Q8IZE3 742 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 PTPRN2Q92932 1015 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 MFSD14AQ96MC6 490 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 ZNF341Q9BYN7 854 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 FAM192AQ9GZU8 254 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 LNPEPQ9UIQ6 1025 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 UBIAD1Q9Y5Z9 338 aa13.08□□□□□ -0.32
CCDC78-213ENST00000482878 CDH16O75309 829 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 EIF2AK2P19525 551 aaKnown RBP13.07□□□□□ -0.32
CCDC78-213ENST00000482878 POLGP54098 1239 aaPredicted RBP13.07□□□□□ -0.32
CCDC78-213ENST00000482878 TAS2R40P59535 323 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 P3H1Q32P28 736 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 LRRC74BQ6ZQY2 392 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 ARHGEF18Q6ZSZ5 1173 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 FAM160B2Q86V87 743 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 NIM1KQ8IY84 436 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 VPS52Q8N1B4 723 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 CLEC4DQ8WXI8 215 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 BSNDQ8WZ55 320 aa13.07□□□□□ -0.32
CCDC78-213ENST00000482878 DEFB129Q9H1M3 183 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms