RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 NOP56O00567 594 aaKnown RBP7.5□□□□□ -1.21
CLK1-212ENST00000482590 SUV39H1O43463 412 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 LAMTOR5O43504 91 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 SURF6O75683 361 aaKnown RBP7.5□□□□□ -1.21
CLK1-212ENST00000482590 FBXO21O94952 628 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 C6P13671 934 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 BACE1P56817 501 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 RPL11P62913 178 aaKnown RBP7.5□□□□□ -1.21
CLK1-212ENST00000482590 JAKMIP3Q5VZ66 844 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 UBE2Q1Q7Z7E8 422 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 CCDC103Q8IW40 242 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 ITPRIPQ8IWB1 547 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 TPH2Q8IWU9 490 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 SOCS4Q8WXH5 440 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 SORCS2Q96PQ0 1159 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 LRRC27Q9C0I9 530 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 SCAND2PQ9GZW5 306 aaPredicted RBP7.5□□□□□ -1.21
CLK1-212ENST00000482590 KLHL11Q9NVR0 708 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 IP6K2Q9UHH9 426 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 ZBTB21Q9ULJ3 1066 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 PHTF1Q9UMS5 762 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 NUB1Q9Y5A7 615 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 TIMM13Q9Y5L4 95 aaPredicted RBP7.5□□□□□ -1.21
CLK1-212ENST00000482590 RLFQ13129 1914 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 RPTORQ8N122 1335 aa7.5□□□□□ -1.21
CLK1-212ENST00000482590 A0A1W2PPC1 479 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 C19orf81C9J6K1 198 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 FIBPO43427 364 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 IDH1O75874 414 aaKnown RBP7.49□□□□□ -1.21
CLK1-212ENST00000482590 SDSP20132 328 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 RENBPP51606 427 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 ZNF143P52747 638 aaPredicted RBP7.49□□□□□ -1.21
CLK1-212ENST00000482590 HERVK_113P62684 666 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 STK3Q13188 491 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 RRP1BQ14684 758 aaKnown RBP7.49□□□□□ -1.21
CLK1-212ENST00000482590 ICAM4Q14773 271 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 IQCEQ6IPM2 695 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 CFAP161Q6P656 301 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 C1orf228Q6PIY5 440 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 CEP68Q76N32 757 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 ADGRA1Q86SQ6 560 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 NKAPQ8N5F7 415 aaKnown RBP7.49□□□□□ -1.21
CLK1-212ENST00000482590 CNTD1Q8N815 330 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 SSH3Q8TE77 659 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 TRIB2Q92519 343 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 TTC17Q96AE7 1141 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 MBD6Q96DN6 1003 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 PAWRQ96IZ0 340 aaKnown RBP7.49□□□□□ -1.21
CLK1-212ENST00000482590 ALDH8A1Q9H2A2 487 aaPredicted RBP7.49□□□□□ -1.21
CLK1-212ENST00000482590 DNAJC18Q9H819 358 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 NLRC4Q9NPP4 1024 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 MORF4L1Q9UBU8 362 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 SAP30BPQ9UHR5 308 aaKnown RBP7.49□□□□□ -1.21
CLK1-212ENST00000482590 TMEFF2Q9UIK5 374 aaPredicted RBP7.49□□□□□ -1.21
CLK1-212ENST00000482590 PNMA8BQ9ULN7 279 aaPredicted RBP7.49□□□□□ -1.21
CLK1-212ENST00000482590 LUC7L2Q9Y383 392 aaKnown RBP7.49□□□□□ -1.21
CLK1-212ENST00000482590 TSC22D4Q9Y3Q8 395 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 LAMA3Q16787 3333 aa7.49□□□□□ -1.21
CLK1-212ENST00000482590 ORC4O43929 436 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 DHX16O60231 1041 aaKnown RBP7.48□□□□□ -1.21
CLK1-212ENST00000482590 ZKSCAN1P17029 563 aaPredicted RBP7.48□□□□□ -1.21
CLK1-212ENST00000482590 POU3F2P20265 443 aaPredicted RBP7.48□□□□□ -1.21
CLK1-212ENST00000482590 CYP2B6P20813 491 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 TACR2P21452 398 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 MAPK4P31152 587 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 BCL6P41182 706 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 DYNLL1P63167 89 aaKnown RBP7.48□□□□□ -1.21
CLK1-212ENST00000482590 NKX3-2P78367 333 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 ATP8B2P98198 1209 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 MAP3K12Q12852 859 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 TOMM20Q15388 145 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 SURF1Q15526 300 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 CDC37Q16543 378 aaPredicted RBP7.48□□□□□ -1.21
CLK1-212ENST00000482590 FOXB2Q5VYV0 432 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 FOXP4Q8IVH2 680 aaPredicted RBP7.48□□□□□ -1.21
CLK1-212ENST00000482590 Q8N1X5 172 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 GPRC5AQ8NFJ5 357 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 DIS3LQ8TF46 1054 aaKnown RBP7.48□□□□□ -1.21
CLK1-212ENST00000482590 PPP1R14AQ96A00 147 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 EXOC2Q96KP1 924 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 YTHDC1Q96MU7 727 aaKnown RBP7.48□□□□□ -1.21
CLK1-212ENST00000482590 EPN3Q9H201 632 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 PIH1D3Q9NQM4 214 aaKnown RBP7.48□□□□□ -1.21
CLK1-212ENST00000482590 DBNLQ9UJU6 430 aaKnown RBP7.48□□□□□ -1.21
CLK1-212ENST00000482590 RCAN3Q9UKA8 241 aa7.48□□□□□ -1.21
CLK1-212ENST00000482590 GREB1LQ9C091 1923 aaPredicted RBP7.47□□□□□ -1.21
CLK1-212ENST00000482590 ERC2O15083 957 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 GLRX3O76003 335 aaKnown RBP7.47□□□□□ -1.21
CLK1-212ENST00000482590 RHOBTB3O94955 611 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 CYP1A1P04798 512 aaPredicted RBP7.47□□□□□ -1.21
CLK1-212ENST00000482590 NAT2P11245 290 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 HOXA7P31268 230 aaPredicted RBP7.47□□□□□ -1.21
CLK1-212ENST00000482590 RGS2P41220 211 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 CCT5P48643 541 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 USP14P54578 494 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 CCNA1P78396 465 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 GRM3Q14832 879 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 FAM133BQ5BKY9 247 aaKnown RBP7.47□□□□□ -1.21
CLK1-212ENST00000482590 GPR158Q5T848 1215 aa7.47□□□□□ -1.21
CLK1-212ENST00000482590 E4F1Q66K89 784 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms