RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 OR5B17Q8NGF7 314 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 ASAP3Q8TDY4 903 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 FNBP1Q96RU3 617 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 AGO2Q9UKV8 859 aaKnown RBP15.75■□□□□ 0.11
ATG4B-220ENST00000482507 PNMA3Q9UL41 463 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 NUB1Q9Y5A7 615 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 PCDHB4Q9Y5E5 795 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 CEP350Q5VT06 3117 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 KIAA1217Q5T5P2 1943 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 ETS1P14921 441 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 ATP4AP20648 1035 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 GCAP28676 217 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 GNA15P30679 374 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 FOXN2P32314 431 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 SSR1P43307 286 aaKnown RBP15.75■□□□□ 0.11
ATG4B-220ENST00000482507 OAZ1P54368 228 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 MGAT5Q09328 741 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 SEZ6Q53EL9 994 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 MIS18BP1Q6P0N0 1132 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 ABHD15Q6UXT9 468 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 ZNF365Q70YC5 407 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 ANKLE1Q8NAG6 615 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 MAGEC3Q8TD91 643 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 RMDN2Q96LZ7 410 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 NOD2Q9HC29 1040 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 JPH1Q9HDC5 661 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-220ENST00000482507 PRKAG3Q9UGI9 489 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 MCM8Q9UJA3 840 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 STYXL1Q9Y6J8 313 aa15.75■□□□□ 0.11
ATG4B-220ENST00000482507 IGF2BP3O00425 579 aaKnown RBP eCLIP15.74■□□□□ 0.11
ATG4B-220ENST00000482507 ATP2A1O14983 1001 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 TLR3O15455 904 aaKnown RBP15.74■□□□□ 0.11
ATG4B-220ENST00000482507 PSAPP07602 524 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 RDXP35241 583 aaKnown RBP15.74■□□□□ 0.11
ATG4B-220ENST00000482507 MAP2K2P36507 400 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 BPIFB4P59827 614 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 ZNF252P-AS1Q0IIN9 211 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 P3H1Q32P28 736 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 CYP4F22Q6NT55 531 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 SPATA21Q7Z572 469 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 PHF13Q86YI8 300 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-220ENST00000482507 FITM2Q8N6M3 262 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 RBBP8NLQ8NC74 664 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-220ENST00000482507 IFT74Q96LB3 600 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 TGS1Q96RS0 853 aaKnown RBP15.74■□□□□ 0.11
ATG4B-220ENST00000482507 BAIAP2L1Q9UHR4 511 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 TLL2Q9Y6L7 1015 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 TMEM88BA6NKF7 163 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 CLTAP09496 248 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 ATP5DP30049 168 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 SP2Q02086 613 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 CNTN2Q02246 1040 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 LIN9Q5TKA1 542 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 RELL1Q8IUW5 271 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 CCDC89Q8N998 374 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 EXD1Q8NHP7 514 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 MAML1Q92585 1016 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 RBM15Q96T37 977 aaKnown RBP eCLIP15.74■□□□□ 0.111e-11■■□□□ 13.7
ATG4B-220ENST00000482507 ACAD9Q9H845 621 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 ECT2Q9H8V3 914 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 SLC9A2Q9UBY0 812 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 DNPEPQ9ULA0 475 aa15.74■□□□□ 0.11
ATG4B-220ENST00000482507 CDH16O75309 829 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 MAGEA4P43358 317 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 WDR4P57081 412 aaKnown RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 HTRA3P83110 453 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 FASTKD3Q14CZ7 662 aaKnown RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 EMC2Q15006 297 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 HP1BP3Q5SSJ5 553 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 KAZNQ674X7 775 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 TXNRD3NBQ6F5E7 133 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 ANKRD35Q8N283 1001 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 GPATCH11Q8N954 259 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 PORCNQ9H237 461 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 CYP39A1Q9NYL5 469 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 RBAKQ9NYW8 714 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 TRIM33Q9UPN9 1127 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 HGSO14964 777 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 LIASO43766 372 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 SUN1O94901 812 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 PGK2P07205 417 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 TAC1P20366 129 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 GLRA2P23416 452 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 FSTL1Q12841 308 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 BNIP1Q12981 228 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 NFX1Q12986 1120 aaKnown RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 XRRA1Q6P2D8 792 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 MFSD7Q6UXD7 560 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 ZCCHC9Q8N567 271 aaKnown RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 ACSF2Q96CM8 615 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 TARS2Q9BW92 718 aaKnown RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 CNTN6Q9UQ52 1028 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.73■□□□□ 0.11
ATG4B-220ENST00000482507 PARP14Q460N5 1801 aa15.73■□□□□ 0.11
ATG4B-220ENST00000482507 CNTNAP2Q9UHC6 1331 aa15.72■□□□□ 0.11
ATG4B-220ENST00000482507 TTLL13PA6NNM8 815 aa15.72■□□□□ 0.11
ATG4B-220ENST00000482507 FAM155AB1AL88 458 aaPredicted RBP15.72■□□□□ 0.11
ATG4B-220ENST00000482507 NQO1P15559 274 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms