RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 RTN4Q9NQC3 1192 aaKnown RBP14.17□□□□□ -0.14
HDAC1-208ENST00000482310 MRPL17Q9NRX2 175 aaKnown RBP14.17□□□□□ -0.14
HDAC1-208ENST00000482310 FAM207AQ9NSI2 230 aaPredicted RBP14.17□□□□□ -0.14
HDAC1-208ENST00000482310 GDAP2Q9NXN4 497 aa14.17□□□□□ -0.14
HDAC1-208ENST00000482310 AJAP1Q9UKB5 411 aaPredicted RBP14.17□□□□□ -0.14
HDAC1-208ENST00000482310 HIDE1A8MVS5 230 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 SYN3O14994 580 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 AP5Z1O43299 807 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 LPXNO60711 386 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 PDGFRBP09619 1106 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 OR4Q2P0C623 313 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 CTSAP10619 480 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 FGFR3P22607 806 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 PSMC1P62191 440 aaKnown RBP14.16□□□□□ -0.14
HDAC1-208ENST00000482310 CAMK1Q14012 370 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 SMC1AQ14683 1233 aaKnown RBP14.16□□□□□ -0.14
HDAC1-208ENST00000482310 PTPN14Q15678 1187 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 CTXN3Q4LDR2 81 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 ADGRD2Q7Z7M1 963 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 RBM23Q86U06 439 aaKnown RBP14.16□□□□□ -0.14
HDAC1-208ENST00000482310 RNF168Q8IYW5 571 aaPredicted RBP14.16□□□□□ -0.14
HDAC1-208ENST00000482310 TOP6BLQ8N6T0 577 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 KBTBD7Q8WVZ9 684 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 MYLIPQ8WY64 445 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 TAF4BQ92750 862 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 TMEM209Q96SK2 561 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 SNX25Q9H3E2 840 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 SIX2Q9NPC8 291 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 DDX43Q9NXZ2 648 aaKnown RBP14.16□□□□□ -0.14
HDAC1-208ENST00000482310 HMGXB4Q9UGU5 601 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 MYO16Q9Y6X6 1858 aa14.16□□□□□ -0.14
HDAC1-208ENST00000482310 TMEM265A0A087WTH1 108 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 GTPBP10A4D1E9 387 aaKnown RBP14.15□□□□□ -0.14
HDAC1-208ENST00000482310 PER2O15055 1255 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 PMM2O15305 246 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 STAU1O95793 577 aaKnown RBP14.15□□□□□ -0.14
HDAC1-208ENST00000482310 EFEMP2O95967 443 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 DSG1Q02413 1049 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 UBE3AQ05086 875 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 CUL2Q13617 745 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 RAPGEF1Q13905 1077 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 CCDC142Q17RM4 750 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 ZNF394Q53GI3 561 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 ZNF280DQ6N043 979 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 PHLDB3Q6NSJ2 640 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 DPH6Q7L8W6 267 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 LNX1Q8TBB1 728 aaPredicted RBP14.15□□□□□ -0.14
HDAC1-208ENST00000482310 LPIN3Q9BQK8 851 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 TRIM5Q9C035 493 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 DPEP3Q9H4B8 488 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 VRTNQ9H8Y1 702 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 APEX2Q9UBZ4 518 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 DSEQ9UL01 958 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 LZTS1Q9Y250 596 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 NME7Q9Y5B8 376 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 FHOD1Q9Y613 1164 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 CDY1Q9Y6F8 540 aa14.15□□□□□ -0.14
HDAC1-208ENST00000482310 ARHGEF37A1IGU5 675 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 LRRC10BA6NIK2 292 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 A8MXQ7 604 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 H7C4K7 107 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 EPHB6O15197 1021 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 ADAM12O43184 909 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 CBFA2T2O43439 604 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 ATP2C2O75185 946 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 CALCAP01258 141 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 PNMA6AP0CW24 399 aaPredicted RBP14.14□□□□□ -0.15
HDAC1-208ENST00000482310 KRT5P13647 590 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 CPB1P15086 417 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 TYMPP19971 482 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 LMO2P25791 158 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 GNL1P36915 607 aaPredicted RBP14.14□□□□□ -0.15
HDAC1-208ENST00000482310 USP8P40818 1118 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 BMS1Q14692 1282 aaKnown RBP14.14□□□□□ -0.15
HDAC1-208ENST00000482310 NR1I3Q14994 352 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 PTPROQ16827 1216 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 KIAA0319Q5VV43 1072 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 IQCEQ6IPM2 695 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 RSPO2Q6UXX9 243 aaPredicted RBP14.14□□□□□ -0.15
HDAC1-208ENST00000482310 ANKS3Q6ZW76 656 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 PALB2Q86YC2 1186 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 THEM5Q8N1Q8 247 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 NEK11Q8NG66 645 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 OR10T2Q8NGX3 314 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 KREMEN1Q96MU8 473 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 GAS2L1Q99501 681 aaPredicted RBP14.14□□□□□ -0.15
HDAC1-208ENST00000482310 BCO2Q9BYV7 579 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 IGFLR1Q9H665 355 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 NLRC4Q9NPP4 1024 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 CHST7Q9NS84 486 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 DNAJC12Q9UKB3 198 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 SIK3Q9Y2K2 1263 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 PCDHB4Q9Y5E5 795 aa14.14□□□□□ -0.15
HDAC1-208ENST00000482310 C2orf16Q68DN1 1984 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 C2orf71A6NGG8 1288 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 FSCN2O14926 492 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 TEX28O15482 410 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 CYP11A1P05108 521 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 TPM3P06753 285 aa14.13□□□□□ -0.15
HDAC1-208ENST00000482310 CNPP09543 421 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms