RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ZNF197O14709 1029 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 EXOC3O60645 756 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 HUS1O60921 280 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 MICAL2O94851 1124 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 ZNF202O95125 648 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 KIF20AO95235 890 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 DLATP10515 647 aaKnown RBP12.79□□□□□ -0.36
HMGN1-213ENST00000482192 ALDH1A3P47895 512 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 EPHB3P54753 998 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 CYP24A1Q07973 514 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 SMARCB1Q12824 385 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 DPYDQ12882 1025 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 DUSP4Q13115 394 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 SLC5A9Q2M3M2 681 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 SLC39A12Q504Y0 691 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 CYP4A22Q5TCH4 519 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 LMBRD2Q68DH5 695 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-213ENST00000482192 PDZD4Q76G19 769 aaPredicted RBP12.79□□□□□ -0.36
HMGN1-213ENST00000482192 TMEM86AQ8N2M4 240 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 PDCL2Q8N4E4 241 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 C2orf15Q8WU43 125 aaKnown RBP12.79□□□□□ -0.36
HMGN1-213ENST00000482192 TMEM174Q8WUU8 243 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 ING5Q8WYH8 240 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 CCDC127Q96BQ5 260 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 FAM84AQ96KN4 292 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 TMEM209Q96SK2 561 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 CGRRF1Q99675 332 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 RTP3Q9BQQ7 232 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 ASAH2Q9NR71 780 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 GDE1Q9NZC3 331 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 CEP72Q9P209 647 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 SNX9Q9Y5X1 595 aa12.79□□□□□ -0.36
HMGN1-213ENST00000482192 PDXKO00764 312 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 NARSO43776 548 aaKnown RBP12.78□□□□□ -0.36
HMGN1-213ENST00000482192 RHOBTB3O94955 611 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 SRFP11831 508 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 TNNI1P19237 187 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 TUFMP49411 452 aaKnown RBP12.78□□□□□ -0.36
HMGN1-213ENST00000482192 EPHA5P54756 1037 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 PRSS36Q5K4E3 855 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 PARM1Q6UWI2 310 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 SLC9A9Q8IVB4 645 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 DCP1BQ8IZD4 617 aaKnown RBP12.78□□□□□ -0.36
HMGN1-213ENST00000482192 TOP6BLQ8N6T0 577 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 ATAD1Q8NBU5 361 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 SPATA18Q8TC71 538 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 FGF14Q92915 247 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 HPDLQ96IR7 371 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 KCNH6Q9H252 994 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 CRISPLD1Q9H336 500 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 KCTD10Q9H3F6 313 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 MFSD1Q9H3U5 465 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 FBXL21Q9UKT6 434 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 L1RE1Q9UN81 338 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 SLC27A5Q9Y2P5 690 aa12.78□□□□□ -0.36
HMGN1-213ENST00000482192 PDGFBP01127 241 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-213ENST00000482192 NR3C1P04150 777 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 CFHP08603 1231 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 MYL4P12829 197 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 CEBPBP17676 345 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 MYL7Q01449 175 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 TSPY1Q01534 308 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 KCNB1Q14721 858 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 SCARA3Q6AZY7 606 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 DPH6Q7L8W6 267 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 TRAPPC11Q7Z392 1133 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 ITIH5Q86UX2 942 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 ADGRF2Q8IZF7 708 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 FMR1NBQ8N0W7 255 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-213ENST00000482192 SPPL2BQ8TCT7 592 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 SEPT5Q99719 369 aaPredicted RBP12.77□□□□□ -0.37
HMGN1-213ENST00000482192 ACBD6Q9BR61 282 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 DMAC2Q9NW81 257 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 DDX43Q9NXZ2 648 aaKnown RBP12.77□□□□□ -0.37
HMGN1-213ENST00000482192 WNT16Q9UBV4 365 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 ASB3Q9Y575 518 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 TECTAO75443 2155 aa12.77□□□□□ -0.37
HMGN1-213ENST00000482192 CALUO43852 315 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-213ENST00000482192 ECI2O75521 394 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 FGF19O95750 216 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 CCR2P41597 374 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 LHX1P48742 406 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 AP3M2P53677 418 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 FAM160A1Q05DH4 1040 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 VEPH1Q14D04 833 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 NFE2Q16621 373 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-213ENST00000482192 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 MGAT5BQ3V5L5 792 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 LRRTM3Q86VH5 581 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 SIX5Q8N196 739 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 TTC9BQ8N6N2 239 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 ST13P5Q8NFI4 369 aaPredicted RBP12.76□□□□□ -0.37
HMGN1-213ENST00000482192 PSMG2Q969U7 264 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 TCEAL4Q96EI5 215 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 MCRS1Q96EZ8 462 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 PRRX2Q99811 253 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 KXD1Q9BQD3 176 aa12.76□□□□□ -0.37
HMGN1-213ENST00000482192 GZF1Q9H116 711 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms