RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 MMEL1Q495T6 779 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 PRR16Q569H4 304 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 MBNL2Q5VZF2 373 aaKnown RBP3.73□□□□□ -1.81
SMC6-208ENST00000481708 TATDN1Q6P1N9 297 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 ADGRG2Q8IZP9 1017 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 OTUD7AQ8TE49 926 aaPredicted RBP3.73□□□□□ -1.81
SMC6-208ENST00000481708 RFFLQ8WZ73 363 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 FBXW5Q969U6 566 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 FOXRED1Q96CU9 486 aaPredicted RBP3.73□□□□□ -1.81
SMC6-208ENST00000481708 MSLNLQ96KJ4 702 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 PTPN18Q99952 460 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 DBNDD1Q9H9R9 158 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 CYP4F12Q9HCS2 524 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 KCND1Q9NSA2 647 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 H7C0S8 307 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 ASNA1O43681 348 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 MAFO75444 373 aaPredicted RBP3.73□□□□□ -1.81
SMC6-208ENST00000481708 ZSCAN22P10073 491 aaPredicted RBP3.73□□□□□ -1.81
SMC6-208ENST00000481708 ABCD3P28288 659 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 LTBRP36941 435 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 DPP6P42658 865 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 KIZQ2M2Z5 673 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 NOL9Q5SY16 702 aaKnown RBP3.73□□□□□ -1.81
SMC6-208ENST00000481708 RRAGBQ5VZM2 374 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 TREML4Q6UXN2 200 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 H1FNTQ75WM6 255 aaPredicted RBP3.73□□□□□ -1.81
SMC6-208ENST00000481708 B4GALNT4Q76KP1 1039 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 PPP1R3BQ86XI6 285 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 VSIG1Q86XK7 387 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 FTSJ3Q8IY81 847 aaKnown RBP3.73□□□□□ -1.81
SMC6-208ENST00000481708 ZNF507Q8TCN5 953 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 SPPL3Q8TCT6 385 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 CSGALNACT1Q8TDX6 532 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 MXD3Q9BW11 206 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 MRPL18Q9H0U6 180 aaKnown RBP3.73□□□□□ -1.81
SMC6-208ENST00000481708 SIL1Q9H173 461 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 ATXN3LQ9H3M9 355 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 BRF2Q9HAW0 419 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 PREBQ9HCU5 417 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 PCDHA13Q9Y5I0 950 aa3.73□□□□□ -1.81
SMC6-208ENST00000481708 F5H0A9 414 aaPredicted RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 H7C1D1 291 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 RTN3O95197 1032 aaPredicted RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 KRT1P04264 644 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 CD3EP07766 207 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 HNRNPA1P09651 372 aaKnown RBP eCLIP3.72□□□□□ -1.81
SMC6-208ENST00000481708 COL8A1P27658 744 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 GABRB3P28472 473 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 MC4RP32245 332 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 CTNNA1P35221 906 aaKnown RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 ASPAP45381 313 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 LGALS4P56470 323 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 RPS16P62249 146 aaKnown RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 CDK17Q00537 523 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 TEKQ02763 1124 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 DUSP4Q13115 394 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 PTK2BQ14289 1009 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 SLC30A6Q6NXT4 461 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 FRMD7Q6ZUT3 714 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 TMEM130Q8N3G9 435 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 SLC35A4Q96G79 324 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 FBXL18Q96ME1 805 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 UBL7Q96S82 380 aaPredicted RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 MPHOSPH8Q99549 860 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 KCTD10Q9H3F6 313 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 IL21RQ9HBE5 538 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 HELLSQ9NRZ9 838 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 ABCF3Q9NUQ8 709 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 CNTNAP5Q8WYK1 1306 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 GLTPD2A6NH11 291 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 CYP21A2P08686 494 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 FPR2P25090 351 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 HADHAP40939 763 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 SLC6A9P48067 706 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 RCAN1P53805 252 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 RTP2Q5QGT7 225 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 ZMYM1Q5SVZ6 1142 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 CDPF1Q6NVV7 123 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 VSIG10LQ86VR7 867 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 RIOX2Q8IUF8 465 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 COLGALT2Q8IYK4 626 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 ST8SIA4Q92187 359 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 CCDC34Q96HJ3 373 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 PSMG3-AS1Q96PY0 264 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 PYM1Q9BRP8 204 aaKnown RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 ITPAQ9BY32 194 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 SEMA6CQ9H3T2 930 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 ACSS3Q9H6R3 686 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 TRPV4Q9HBA0 871 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 SIK3Q9Y2K2 1263 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 PITPNM2Q9BZ72 1349 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 HTTP42858 3142 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 PABPN1LA6NDY0 278 aaKnown RBP3.72□□□□□ -1.81
SMC6-208ENST00000481708 GOLGA6L3A6NEY3 463 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 WASH4PA8MWX3 477 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 H3BNC9 293 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 UBE2CO00762 179 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 SCDO00767 359 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 IRAK2O43187 625 aa3.72□□□□□ -1.81
SMC6-208ENST00000481708 TGFB1I1O43294 461 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms