RNA–Protein interactions for RNA: ENST00000481152.2

CHCHD3-205, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 2

Gene CHCHD3, Length 1,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-205ENST00000481152 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.72□□□□□ -1.49
CHCHD3-205ENST00000481152 RBM8AQ9Y5S9 174 aaKnown RBP5.72□□□□□ -1.49
CHCHD3-205ENST00000481152 USP42Q9H9J4 1324 aaKnown RBP5.72□□□□□ -1.49
CHCHD3-205ENST00000481152 MAP3K5Q99683 1374 aa5.72□□□□□ -1.49
CHCHD3-205ENST00000481152 A0A1W2PRX2 142 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 PRPF6O94906 941 aaKnown RBP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 KIF20AO95235 890 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 APOL3O95236 402 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 CAVIN2O95810 425 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 HMOX1P09601 288 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 TBX2Q13207 712 aaPredicted RBP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 ACAP1Q15027 740 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 SEPT7Q16181 437 aaKnown RBP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 NRN1LQ496H8 165 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 TSHZ3Q63HK5 1081 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 CYB5RLQ6IPT4 315 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 MZT2BQ6NZ67 158 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 RSRC2Q7L4I2 434 aaKnown RBP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 C16orf71Q8IYS4 520 aaPredicted RBP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 SLC16A11Q8NCK7 471 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 OTUD7AQ8TE49 926 aaPredicted RBP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 CHTF18Q8WVB6 975 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 RSPH1Q8WYR4 309 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 EXTL1Q92935 676 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 TTC1Q99614 292 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 MEIS3Q99687 375 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 EIF2AK1Q9BQI3 630 aaKnown RBP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 THUMPD2Q9BTF0 503 aaKnown RBP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 FUCA2Q9BTY2 467 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 MYL10Q9BUA6 226 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 PITHD1Q9GZP4 211 aaPredicted RBP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 MTG2Q9H4K7 406 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 ANLNQ9NQW6 1124 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 TLR9Q9NR96 1032 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 DNAI1Q9UI46 699 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 NAP1L2Q9ULW6 460 aaPredicted RBP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 ELP1O95163 1332 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 TTC21AQ8NDW8 1320 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 RAD50Q92878 1312 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 LMTK3Q96Q04 1460 aa5.71□□□□□ -1.5
CHCHD3-205ENST00000481152 MED1Q15648 1581 aaPredicted RBP5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 CEP170BQ9Y4F5 1589 aaPredicted RBP5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 A0A0A6YYJ9 748 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 GOLGA6L6A8MZA4 724 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 CTIFO43310 598 aaKnown RBP5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 SNUPNO95149 360 aaKnown RBP5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 HOXB7P09629 217 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 SLC5A1P13866 664 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 ACRV1P26436 265 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 CYP2C19P33261 490 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 AK2P54819 239 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 BPIFB4P59827 614 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 ZBED6P86452 979 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 HHEXQ03014 270 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 DMTNQ08495 405 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 FOXE3Q13461 319 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 EIF4A2Q14240 407 aaKnown RBP5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 SPECC1Q5M775 1068 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 WDR45BQ5MNZ6 344 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 KIAA1841Q6NSI8 718 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 UNQ6494/PRO21346Q6UXR6 183 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 LDHAL6AQ6ZMR3 332 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 CLEC14AQ86T13 490 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 D2HGDHQ8N465 521 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 PDCL2Q8N4E4 241 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 ANKRD53Q8N9V6 530 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 IL17REQ8NFR9 667 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 SSH3Q8TE77 659 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 USP7Q93009 1102 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 RPL10LQ96L21 214 aaKnown RBP5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 ZSCAN31Q96LW9 406 aaPredicted RBP5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 TBATAQ96M53 351 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 GPHA2Q96T91 129 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 MYD88Q99836 296 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 SCAND2PQ9GZW5 306 aaPredicted RBP5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 SRRDQ9UH36 339 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 SAP30BPQ9UHR5 308 aaKnown RBP5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 ANKRD6Q9Y2G4 727 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 KIF3AQ9Y496 699 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 KDM3BQ7LBC6 1761 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 SBNO1A3KN83 1393 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 USP6P35125 1406 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 PHRF1Q9P1Y6 1649 aaKnown RBP5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 UBR1Q8IWV7 1749 aa5.7□□□□□ -1.5
CHCHD3-205ENST00000481152 J3KRW8 73 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 NEMP1O14524 444 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 FZD7O75084 574 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 LPOP22079 712 aaPredicted RBP5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 CD40P25942 277 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 HIBADHP31937 336 aaKnown RBP5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 GDF5P43026 501 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 RXRGP48443 463 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 ADAM8P78325 824 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 SMAD3P84022 425 aaKnown RBP5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 LRRC32Q14392 662 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 TAF11Q15544 211 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 MIIPQ5JXC2 388 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 CCDC30Q5VVM6 783 aa5.69□□□□□ -1.5
CHCHD3-205ENST00000481152 RBM43Q6ZSC3 357 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms