RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 TMEM41AQ96HV5 264 aa6.57□□□□□ -1.36
BRAF-203ENST00000479537 SCLT1Q96NL6 688 aa6.57□□□□□ -1.36
BRAF-203ENST00000479537 HERPUD2Q9BSE4 406 aa6.57□□□□□ -1.36
BRAF-203ENST00000479537 TLR10Q9BXR5 811 aa6.57□□□□□ -1.36
BRAF-203ENST00000479537 ZSCAN32Q9NX65 697 aa6.57□□□□□ -1.36
BRAF-203ENST00000479537 PPP4R1LQ9P1A2 415 aa6.57□□□□□ -1.36
BRAF-203ENST00000479537 MYO1AQ9UBC5 1043 aa6.57□□□□□ -1.36
BRAF-203ENST00000479537 XPR1Q9UBH6 696 aa6.57□□□□□ -1.36
BRAF-203ENST00000479537 A0A087WWL8 130 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 hCG_1642624A0A1W2PR95 340 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 KLRG2A4D1S0 409 aaPredicted RBP6.56□□□□□ -1.36
BRAF-203ENST00000479537 POLRMTO00411 1230 aaKnown RBP6.56□□□□□ -1.36
BRAF-203ENST00000479537 NPHP1O15259 732 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 PRSS23O95084 383 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 CKBP12277 381 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 MYL4P12829 197 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 CHRM3P20309 590 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 EEF1GP26641 437 aaKnown RBP6.56□□□□□ -1.36
BRAF-203ENST00000479537 HTRA4P83105 476 aaPredicted RBP6.56□□□□□ -1.36
BRAF-203ENST00000479537 ZNF844Q08AG5 666 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 CSRP2Q16527 193 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 MPEG1Q2M385 716 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 TSHZ3Q63HK5 1081 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 FBXO38Q6PIJ6 1188 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 YAF2Q8IY57 180 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 CCDC150Q8NCX0 1101 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 MYRIPQ8NFW9 859 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 TRIM63Q969Q1 353 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 MUL1Q969V5 352 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 SPSB4Q96A44 273 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 MOGAT1Q96PD6 335 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 TTYH3Q9C0H2 523 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 ZCCHC4Q9H5U6 513 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 SLC30A1Q9Y6M5 507 aa6.56□□□□□ -1.36
BRAF-203ENST00000479537 E9PLN8 166 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 FOXS1O43638 330 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 PLATP00750 562 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 ZSCAN22P10073 491 aaPredicted RBP6.55□□□□□ -1.36
BRAF-203ENST00000479537 FCER1AP12319 257 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 XRCC6P12956 609 aaKnown RBP eCLIP6.55□□□□□ -1.36
BRAF-203ENST00000479537 PTTG1IPP53801 180 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 SATB1Q01826 763 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 NHLH2Q02577 135 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 BLMHQ13867 455 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 PUM3Q15397 648 aaKnown RBP6.55□□□□□ -1.36
BRAF-203ENST00000479537 TBC1D10BQ4KMP7 808 aaPredicted RBP6.55□□□□□ -1.36
BRAF-203ENST00000479537 CCDC38Q502W7 563 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 DCAF17Q5H9S7 520 aaPredicted RBP6.55□□□□□ -1.36
BRAF-203ENST00000479537 SLC30A10Q6XR72 485 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 DNERQ8NFT8 737 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 PPM1EQ8WY54 764 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 MARS2Q96GW9 593 aaKnown RBP6.55□□□□□ -1.36
BRAF-203ENST00000479537 VKORC1Q9BQB6 163 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 SPATA5L1Q9BVQ7 753 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 CHST8Q9H2A9 424 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 EIF2B4Q9UI10 523 aaKnown RBP6.55□□□□□ -1.36
BRAF-203ENST00000479537 MID2Q9UJV3 735 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 MAN2B2Q9Y2E5 1009 aa6.55□□□□□ -1.36
BRAF-203ENST00000479537 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 RAB27BO00194 218 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 FFAR2O15552 330 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 TXNP10599 105 aaKnown RBP6.54□□□□□ -1.36
BRAF-203ENST00000479537 SLFN5Q08AF3 891 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 RAPGEF1Q13905 1077 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 METTL24Q5JXM2 366 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 TAPT1Q6NXT6 567 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 LAYNQ6UX15 382 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 LIMS2Q7Z4I7 341 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 C1QL4Q86Z23 238 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 SYT12Q8IV01 421 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 CFAP52Q8N1V2 620 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 NSUN7Q8NE18 718 aaKnown RBP6.54□□□□□ -1.36
BRAF-203ENST00000479537 SLC46A1Q96NT5 459 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 TRIB1Q96RU8 372 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 PPP1R9BQ96SB3 815 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 PNKPQ96T60 521 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 TTLL2Q9BWV7 592 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 GPR87Q9BY21 358 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 MRPS18AQ9NVS2 196 aaKnown RBP6.54□□□□□ -1.36
BRAF-203ENST00000479537 SLC39A10Q9ULF5 831 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 ATP11BQ9Y2G3 1177 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 TBC1D30Q9Y2I9 924 aa6.54□□□□□ -1.36
BRAF-203ENST00000479537 USP15Q9Y4E8 981 aaPredicted RBP6.54□□□□□ -1.36
BRAF-203ENST00000479537 OTOL1A6NHN0 477 aaPredicted RBP6.53□□□□□ -1.36
BRAF-203ENST00000479537 GOLGA6L6A8MZA4 724 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 CYP27B1O15528 508 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 ERN1O75460 977 aaKnown RBP6.53□□□□□ -1.36
BRAF-203ENST00000479537 SKAP2O75563 359 aaPredicted RBP6.53□□□□□ -1.36
BRAF-203ENST00000479537 IL1R1P14778 569 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 COMTP21964 271 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 GCSHP23434 173 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 APOBEC3AP31941 199 aaPredicted RBP6.53□□□□□ -1.36
BRAF-203ENST00000479537 ALDH9A1P49189 494 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 RNASE9P60153 205 aaKnown RBP6.53□□□□□ -1.36
BRAF-203ENST00000479537 KRT17Q04695 432 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 CRHR2Q13324 411 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 SLC29A2Q14542 456 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 IQCB1Q15051 598 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 FOXR2Q6PJQ5 311 aa6.53□□□□□ -1.36
BRAF-203ENST00000479537 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms