RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 RAB6BQ9NRW1 208 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 FAM49BQ9NUQ9 324 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 LRFN2Q9ULH4 789 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 PDGFRBP09619 1106 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 JADE1Q6IE81 842 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 C11orf63Q6NUN7 778 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 GTF3C2Q8WUA4 911 aaPredicted RBP15.05■□□□□ 0
COL20A1-206ENST00000479501 GRAMD1AQ96CP6 724 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 FAM129AQ9BZQ8 928 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 ABT1Q9ULW3 272 aaKnown RBP15.05■□□□□ 0
COL20A1-206ENST00000479501 REXO2Q9Y3B8 237 aaKnown RBP15.05■□□□□ 0
COL20A1-206ENST00000479501 SPEF2Q9C093 1822 aa15.05■□□□□ 0
COL20A1-206ENST00000479501 F5H423 210 aaPredicted RBP15.05■□□□□ -0
COL20A1-206ENST00000479501 LPXNO60711 386 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 APRTP07741 180 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 NCF2P19878 526 aaPredicted RBP15.05■□□□□ -0
COL20A1-206ENST00000479501 DYNC1I2Q13409 638 aaKnown RBP15.05■□□□□ -0
COL20A1-206ENST00000479501 ARSHQ5FYA8 562 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 METTL7BQ6UX53 244 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 NT5DC3Q86UY8 548 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 SCN4BQ8IWT1 228 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 UBA3Q8TBC4 463 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 SPATA18Q8TC71 538 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 SPATC1LQ9H0A9 340 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 GANQ9H2C0 597 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 BFARQ9NZS9 450 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 H3BRJ5 948 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 HAUS5O94927 633 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 RARBP10826 455 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 STMN1P16949 149 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 AP1B1Q10567 949 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 VSIG10LQ86VR7 867 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 SDCCAG3Q96C92 435 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 DRC3Q9H069 523 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 RSAD1Q9HA92 442 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 GGT7Q9UJ14 662 aa15.05■□□□□ -0
COL20A1-206ENST00000479501 CFLARO15519 480 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 PSTPIP1O43586 416 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 APOEP02649 317 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 TGFB3P10600 412 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 ITGB5P18084 799 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 PTENP60484 403 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 MAP4K3Q8IVH8 894 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 ARHGEF26Q96DR7 871 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 A1CFQ9NQ94 594 aaKnown RBP15.04■□□□□ -0
COL20A1-206ENST00000479501 G3BP2Q9UN86 482 aaKnown RBP15.04■□□□□ -0
COL20A1-206ENST00000479501 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.04■□□□□ -0
COL20A1-206ENST00000479501 SETD1AO15047 1707 aaKnown RBP15.04■□□□□ -0
COL20A1-206ENST00000479501 CCL15-CCL14A0A0B4J2E2 113 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 CES2O00748 559 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 FAM107AO95990 144 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 TSPY1Q01534 308 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 PPP3CAQ08209 521 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 PTGISQ16647 500 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 CCL15Q16663 113 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 MPZL3Q6UWV2 235 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 KDM7AQ6ZMT4 941 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 KDM3BQ7LBC6 1761 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 TBC1D12O60347 775 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 KPNA2P52292 529 aaKnown RBP15.04■□□□□ -0
COL20A1-206ENST00000479501 IRX1P78414 480 aaPredicted RBP15.04■□□□□ -0
COL20A1-206ENST00000479501 GCNT1Q02742 428 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 SYCP2LQ5T4T6 812 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 KIAA1841Q6NSI8 718 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 PID1Q7Z2X4 250 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 APPL2Q8NEU8 664 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 TTC1Q99614 292 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 BEGAINQ9BUH8 593 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 SLC13A1Q9BZW2 595 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 ANLNQ9NQW6 1124 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 PPP2R3BQ9Y5P8 575 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 TMEM120BA0PK00 339 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 PROSCO94903 275 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 CYP2C9P11712 490 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 CLEC16AQ2KHT3 1053 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 MCUQ8NE86 351 aa15.04■□□□□ -0
COL20A1-206ENST00000479501 ACSF2Q96CM8 615 aaPredicted RBP15.04■□□□□ -0
COL20A1-206ENST00000479501 MRPL46Q9H2W6 279 aaKnown RBP15.04■□□□□ -0
COL20A1-206ENST00000479501 SMG5Q9UPR3 1016 aaKnown RBP15.04■□□□□ -0
COL20A1-206ENST00000479501 RARGP13631 454 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 MYL6P60660 151 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 VPS11Q9H270 941 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 METTL5Q9NRN9 209 aaKnown RBP15.03■□□□□ -0
COL20A1-206ENST00000479501 ADARB2Q9NS39 739 aaKnown RBP15.03■□□□□ -0
COL20A1-206ENST00000479501 DONSONQ9NYP3 566 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 USP20Q9Y2K6 914 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 RGPD2P0DJD1 1756 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 GOLGA8QA0A0J9YX86 632 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 GOLGA8OA6NCC3 632 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 GOLGA8NF8WBI6 632 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 GOLGA8RI6L899 631 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 TNPO2O14787 897 aaKnown RBP15.03■□□□□ -0
COL20A1-206ENST00000479501 C1orf146Q5VVC0 180 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 SPATA21Q7Z572 469 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 FBXO16Q8IX29 292 aaPredicted RBP15.03■□□□□ -0
COL20A1-206ENST00000479501 MDM1Q8TC05 714 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 SGSM3Q96HU1 749 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 UBIAD1Q9Y5Z9 338 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 ANKRD63C9JTQ0 380 aa15.03■□□□□ -0
COL20A1-206ENST00000479501 MAP2K7O14733 419 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms