RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 MAP7D1Q3KQU3 841 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 FBXO43Q4G163 708 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 C2orf27AQ580R0 203 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 FAM181AQ8N9Y4 354 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 DYDC2Q96IM9 177 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 LPIN3Q9BQK8 851 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 SLC46A2Q9BY10 475 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 NFKBIZQ9BYH8 718 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 POLR3FQ9H1D9 316 aaPredicted RBP13.45□□□□□ -0.26
HDAC8-217ENST00000478743 APOBEC2Q9Y235 224 aaKnown RBP13.45□□□□□ -0.26
HDAC8-217ENST00000478743 SLC27A5Q9Y2P5 690 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 NID2Q14112 1375 aa13.45□□□□□ -0.26
HDAC8-217ENST00000478743 TEP1Q99973 2627 aaKnown RBP13.44□□□□□ -0.26
HDAC8-217ENST00000478743 H7C4K7 107 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 TRAPPC3O43617 180 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 ATXN1LP0C7T5 689 aaKnown RBP13.44□□□□□ -0.26
HDAC8-217ENST00000478743 CHMLP26374 656 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 ADD1P35611 737 aaKnown RBP13.44□□□□□ -0.26
HDAC8-217ENST00000478743 EIF2S3P41091 472 aaKnown RBP13.44□□□□□ -0.26
HDAC8-217ENST00000478743 HNRNPDQ14103 355 aaKnown RBP13.44□□□□□ -0.26
HDAC8-217ENST00000478743 DNAJB7Q7Z6W7 309 aaPredicted RBP13.44□□□□□ -0.26
HDAC8-217ENST00000478743 C4orf19Q8IY42 314 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 CEP120Q8N960 986 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 LSM14AQ8ND56 463 aaKnown RBP13.44□□□□□ -0.26
HDAC8-217ENST00000478743 DDX12PQ92771 950 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 USP13Q92995 863 aaPredicted RBP13.44□□□□□ -0.26
HDAC8-217ENST00000478743 CD101Q93033 1021 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 ZMAT2Q96NC0 199 aaKnown RBP13.44□□□□□ -0.26
HDAC8-217ENST00000478743 FZD8Q9H461 694 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 TASP1Q9H6P5 420 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 ZDHHC4Q9NPG8 344 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 PCOLCE2Q9UKZ9 415 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 TPCN1Q9ULQ1 816 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 PPME1Q9Y570 386 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 PCDHB9Q9Y5E1 797 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 ANK1P16157 1881 aa13.44□□□□□ -0.26
HDAC8-217ENST00000478743 A0A087WWV3 80 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 SMIM28A0A1B0GU29 152 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 LRRIQ4A6NIV6 560 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 K7EQS6 105 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 SYN3O14994 580 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 N4BP3O15049 544 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 SGSM2O43147 1006 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 MAP3K13O43283 966 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 ZBTB43O43298 467 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 P4HBP07237 508 aaKnown RBP13.43□□□□□ -0.26
HDAC8-217ENST00000478743 WEE1P30291 646 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 USP11P51784 963 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 KCNC4Q03721 635 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 MESP2Q0VG99 397 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 PPP2R5CQ13362 524 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 PTPAQ15257 358 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 CRY1Q16526 586 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 ZNF280DQ6N043 979 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 GLRX5Q86SX6 157 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 CHD1LQ86WJ1 897 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 PSMG2Q969U7 264 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 C18orf25Q96B23 403 aaPredicted RBP13.43□□□□□ -0.26
HDAC8-217ENST00000478743 UROC1Q96N76 676 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 THG1LQ9NWX6 298 aaKnown RBP13.43□□□□□ -0.26
HDAC8-217ENST00000478743 VPS54Q9P1Q0 977 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 MMP17Q9ULZ9 603 aa13.43□□□□□ -0.26
HDAC8-217ENST00000478743 CYP3A7-CYP3A51PA0A087WV96 503 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 GOLGA8CPA6NN73 597 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 SLC27A2O14975 620 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 DKK1O94907 266 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 CYP3A7P24462 503 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 NMT1P30419 496 aaKnown RBP13.42□□□□□ -0.26
HDAC8-217ENST00000478743 EPHB3P54753 998 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 CLDN6P56747 220 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 ARHGAP15Q53QZ3 475 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 CDCA2Q69YH5 1023 aaPredicted RBP13.42□□□□□ -0.26
HDAC8-217ENST00000478743 TMEM150AQ86TG1 271 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 SLC41A1Q8IVJ1 513 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 EXOC8Q8IYI6 725 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 ATAD1Q8NBU5 361 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 SPRYD3Q8NCJ5 442 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 BSNDQ8WZ55 320 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 IL21RQ9HBE5 538 aa13.42□□□□□ -0.26
HDAC8-217ENST00000478743 PRMT7Q9NVM4 692 aaPredicted RBP13.42□□□□□ -0.26
HDAC8-217ENST00000478743 TIMM13Q9Y5L4 95 aaPredicted RBP13.42□□□□□ -0.26
HDAC8-217ENST00000478743 CITO14578 2027 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 MTMR11A4FU01 709 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 SGK1O00141 431 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 WISP1O95388 367 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 LIG1P18858 919 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 PLD1Q13393 1074 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 MAEAQ7L5Y9 396 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 FMNL3Q8IVF7 1028 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 SMC5Q8IY18 1101 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 CMTM8Q8IZV2 173 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 STKLD1Q8NE28 680 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 BAHD1Q8TBE0 780 aaPredicted RBP13.41□□□□□ -0.26
HDAC8-217ENST00000478743 SPACA7Q96KW9 195 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 SUSD3Q96L08 255 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 ECT2Q9H8V3 914 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 WNT6Q9Y6F9 365 aa13.41□□□□□ -0.26
HDAC8-217ENST00000478743 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms