RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 STXBP5Q5T5C0 1151 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 METTL23Q86XA0 190 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 BRSK2Q8IWQ3 736 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 FANCMQ8IYD8 2048 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 NOC3LQ8WTT2 800 aaKnown RBP24.65■■□□□ 1.54
C9orf3-216ENST00000478603 HPS3Q969F9 1004 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 CBWD1Q9BRT8 395 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 TRMT61BQ9BVS5 477 aaKnown RBP24.65■■□□□ 1.54
C9orf3-216ENST00000478603 ZCWPW1Q9H0M4 648 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 PCIF1Q9H4Z3 704 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 DSEQ9UL01 958 aa24.65■■□□□ 1.54
C9orf3-216ENST00000478603 F5P12259 2224 aa24.64■■□□□ 1.54
C9orf3-216ENST00000478603 SHISA7A6NL88 538 aa24.64■■□□□ 1.54
C9orf3-216ENST00000478603 SP9P0CG40 484 aa24.64■■□□□ 1.54
C9orf3-216ENST00000478603 GDI1P31150 447 aa24.64■■□□□ 1.54
C9orf3-216ENST00000478603 SCARA3Q6AZY7 606 aa24.64■■□□□ 1.54
C9orf3-216ENST00000478603 DNAJB7Q7Z6W7 309 aaPredicted RBP24.64■■□□□ 1.54
C9orf3-216ENST00000478603 GPIHBP1Q8IV16 184 aa24.64■■□□□ 1.54
C9orf3-216ENST00000478603 GLIS3Q8NEA6 775 aa24.64■■□□□ 1.54
C9orf3-216ENST00000478603 DNASE1L2Q92874 299 aa24.64■■□□□ 1.54
C9orf3-216ENST00000478603 SEPT5Q99719 369 aaPredicted RBP24.64■■□□□ 1.54
C9orf3-216ENST00000478603 LPIN3Q9BQK8 851 aa24.64■■□□□ 1.54
C9orf3-216ENST00000478603 BCO2Q9BYV7 579 aa24.64■■□□□ 1.54
C9orf3-216ENST00000478603 RBAKQ9NYW8 714 aaPredicted RBP24.64■■□□□ 1.54
C9orf3-216ENST00000478603 KPNA7A9QM74 516 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 PSMC3P17980 439 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 GARTP22102 1010 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 POLR2BP30876 1174 aaKnown RBP24.63■■□□□ 1.53
C9orf3-216ENST00000478603 ALCAMQ13740 583 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 FOXD4L6Q3SYB3 417 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-216ENST00000478603 SV2CQ496J9 727 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 FOXD4L3Q6VB84 417 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-216ENST00000478603 GAREM2Q75VX8 874 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 LRRTM3Q86VH5 581 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 NT5DC4Q86YG4 428 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 CCDC65Q8IXS2 484 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 MAML2Q8IZL2 1156 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-216ENST00000478603 THEM5Q8N1Q8 247 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 SNX21Q969T3 373 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 PSMG2Q969U7 264 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 RSPRY1Q96DX4 576 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 ZNF396Q96N95 335 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-216ENST00000478603 OSBPL6Q9BZF3 934 aa24.63■■□□□ 1.53
C9orf3-216ENST00000478603 SPATA6Q9NWH7 488 aaPredicted RBP24.63■■□□□ 1.53
C9orf3-216ENST00000478603 HEPACAM2A8MVW5 462 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 PPP6R2O75170 966 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 ITGB3P05106 788 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 E2F4Q16254 413 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 MGAT5BQ3V5L5 792 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 ZNF852Q6ZMS4 543 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 C1orf127Q8N9H9 656 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 FAM200AQ8TCP9 573 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 DHX58Q96C10 678 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 ZNF560Q96MR9 790 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 TRPV4Q9HBA0 871 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 AGAP1Q9UPQ3 857 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 ASB3Q9Y575 518 aa24.62■■□□□ 1.53
C9orf3-216ENST00000478603 LDHAP00338 332 aaKnown RBP24.61■■□□□ 1.53
C9orf3-216ENST00000478603 ATF6P18850 670 aa24.61■■□□□ 1.53
C9orf3-216ENST00000478603 ADSSL1Q8N142 457 aa24.61■■□□□ 1.53
C9orf3-216ENST00000478603 DEPDC1BQ8WUY9 529 aa24.61■■□□□ 1.53
C9orf3-216ENST00000478603 IRF7Q92985 503 aa24.61■■□□□ 1.53
C9orf3-216ENST00000478603 GPR88Q9GZN0 384 aa24.61■■□□□ 1.53
C9orf3-216ENST00000478603 TNMDQ9H2S6 317 aa24.61■■□□□ 1.53
C9orf3-216ENST00000478603 ATXN3LQ9H3M9 355 aa24.61■■□□□ 1.53
C9orf3-216ENST00000478603 TMEM206Q9H813 350 aa24.61■■□□□ 1.53
C9orf3-216ENST00000478603 PDE11AQ9HCR9 933 aa24.61■■□□□ 1.53
C9orf3-216ENST00000478603 HSFX1Q9UBD0 423 aa24.61■■□□□ 1.53
C9orf3-216ENST00000478603 NUP210Q8TEM1 1887 aaPredicted RBP24.61■■□□□ 1.53
C9orf3-216ENST00000478603 EXTL3O43909 919 aa24.6■■□□□ 1.53
C9orf3-216ENST00000478603 GABRR2P28476 465 aa24.6■■□□□ 1.53
C9orf3-216ENST00000478603 TUFMP49411 452 aaKnown RBP24.6■■□□□ 1.53
C9orf3-216ENST00000478603 SHC4Q6S5L8 630 aa24.6■■□□□ 1.53
C9orf3-216ENST00000478603 ITIH5Q86UX2 942 aa24.6■■□□□ 1.53
C9orf3-216ENST00000478603 MFSD6LQ8IWD5 586 aa24.6■■□□□ 1.53
C9orf3-216ENST00000478603 KCNG4Q8TDN1 519 aa24.6■■□□□ 1.53
C9orf3-216ENST00000478603 MKNK1Q9BUB5 465 aa24.6■■□□□ 1.53
C9orf3-216ENST00000478603 KBTBD4Q9NVX7 518 aa24.6■■□□□ 1.53
C9orf3-216ENST00000478603 ABI2Q9NYB9 513 aaPredicted RBP24.6■■□□□ 1.53
C9orf3-216ENST00000478603 NDRG2Q9UN36 371 aaKnown RBP24.6■■□□□ 1.53
C9orf3-216ENST00000478603 ZNF263O14978 683 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 CUTAO60888 179 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 YEATS4O95619 227 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 PNPLA4P41247 253 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 FZD5Q13467 585 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 GPR158Q5T848 1215 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 LMBRD2Q68DH5 695 aaPredicted RBP24.59■■□□□ 1.53
C9orf3-216ENST00000478603 ARID3BQ8IVW6 561 aaPredicted RBP24.59■■□□□ 1.53
C9orf3-216ENST00000478603 CSGALNACT2Q8N6G5 542 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 CXorf38Q8TB03 319 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 GIPC2Q8TF65 315 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 CACTINQ8WUQ7 758 aaKnown RBP24.59■■□□□ 1.53
C9orf3-216ENST00000478603 CLDN23Q96B33 292 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 NELL2Q99435 816 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 TRIM9Q9C026 710 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 TMLHEQ9NVH6 421 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 MRPS17Q9Y2R5 130 aaKnown RBP24.59■■□□□ 1.53
C9orf3-216ENST00000478603 DENND4CQ5VZ89 1909 aa24.59■■□□□ 1.53
C9orf3-216ENST00000478603 LAMTOR5O43504 91 aa24.58■■□□□ 1.53
C9orf3-216ENST00000478603 KRT19P08727 400 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms