RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 PKP1Q13835 747 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 UBXN2BQ14CS0 331 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 VEPH1Q14D04 833 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 SLC39A12Q504Y0 691 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 FOXD4L5Q5VV16 416 aaPredicted RBP11.71□□□□□ -0.53
VANGL1-206ENST00000478369 CNNM4Q6P4Q7 775 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 C1orf228Q6PIY5 440 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 TPRG1Q6ZUI0 275 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 TMC8Q8IU68 726 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 MFSD6LQ8IWD5 586 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 EFCAB13Q8IY85 973 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 DCP1BQ8IZD4 617 aaKnown RBP11.71□□□□□ -0.53
VANGL1-206ENST00000478369 LRRC52Q8N7C0 313 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 ATAD1Q8NBU5 361 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 SHKBP1Q8TBC3 707 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 ZSCAN18Q8TBC5 510 aaPredicted RBP11.71□□□□□ -0.53
VANGL1-206ENST00000478369 SPATA18Q8TC71 538 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 SPPL2BQ8TCT7 592 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 FOXD4L4Q8WXT5 416 aaPredicted RBP11.71□□□□□ -0.53
VANGL1-206ENST00000478369 CLDN23Q96B33 292 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 MSANTD3Q96H12 275 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 ZSWIM3Q96MP5 696 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 PYM1Q9BRP8 204 aaKnown RBP11.71□□□□□ -0.53
VANGL1-206ENST00000478369 IER2Q9BTL4 223 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 DNAJC25Q9H1X3 360 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 CRISPLD1Q9H336 500 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 ZNF334Q9HCZ1 680 aaPredicted RBP11.71□□□□□ -0.53
VANGL1-206ENST00000478369 KBTBD4Q9NVX7 518 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 RBAKQ9NYW8 714 aaPredicted RBP11.71□□□□□ -0.53
VANGL1-206ENST00000478369 TBC1D7Q9P0N9 293 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 ZMYM5Q9UJ78 669 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 FBXO4Q9UKT5 387 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 ITGA11Q9UKX5 1188 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 ANK1P16157 1881 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 CFAP54Q96N23 3096 aa11.71□□□□□ -0.53
VANGL1-206ENST00000478369 A0A1W2PRU2 124 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 LAMTOR5O43504 91 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 CUTAO60888 179 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 SP9P0CG40 484 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 CASP5P51878 434 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 TEAD2Q15562 447 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 ARHGAP15Q53QZ3 475 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 VITQ6UXI7 678 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 DNAJB7Q7Z6W7 309 aaPredicted RBP11.7□□□□□ -0.54
VANGL1-206ENST00000478369 TMEM86AQ8N2M4 240 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 PDILTQ8N807 584 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 IQUBQ8NA54 791 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 OR10T2Q8NGX3 314 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 KCNG4Q8TDN1 519 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 TMEM209Q96SK2 561 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 PANK2Q9BZ23 570 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 IKZF4Q9H2S9 585 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 SLITRK6Q9H5Y7 841 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 MAGEF1Q9HAY2 307 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 KIAA1586Q9HCI6 787 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 HEBP1Q9NRV9 189 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 OBP2AQ9NY56 170 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 CFAP45Q9UL16 551 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 SLC27A5Q9Y2P5 690 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 TSC2P49815 1807 aa11.7□□□□□ -0.54
VANGL1-206ENST00000478369 MIA3Q5JRA6 1907 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 ZNF263O14978 683 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 CHADO15335 359 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 EIF3DO15371 548 aaKnown RBP eCLIP11.69□□□□□ -0.54
VANGL1-206ENST00000478369 HUS1O60921 280 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 LMNAP02545 664 aaKnown RBP11.69□□□□□ -0.54
VANGL1-206ENST00000478369 CDC25CP30307 473 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 GDI1P31150 447 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 SNRPFP62306 86 aaKnown RBP11.69□□□□□ -0.54
VANGL1-206ENST00000478369 TFAMQ00059 246 aaKnown RBP11.69□□□□□ -0.54
VANGL1-206ENST00000478369 TSPY1Q01534 308 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 FCHO2Q0JRZ9 810 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 GRM2Q14416 872 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 SURF1Q15526 300 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 E2F4Q16254 413 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 NFE2Q16621 373 aaPredicted RBP11.69□□□□□ -0.54
VANGL1-206ENST00000478369 MGAT5BQ3V5L5 792 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 WSCD1Q658N2 575 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 MAMSTRQ6ZN01 415 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 GPD1LQ8N335 351 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 C1orf127Q8N9H9 656 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 LEO1Q8WVC0 666 aaPredicted RBP11.69□□□□□ -0.54
VANGL1-206ENST00000478369 SAAL1Q96ER3 474 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 GCNAQ96QF7 691 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 ACBD6Q9BR61 282 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 TRIM9Q9C026 710 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 SPATA6Q9NWH7 488 aaPredicted RBP11.69□□□□□ -0.54
VANGL1-206ENST00000478369 GDAP2Q9NXN4 497 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 MTF2Q9Y483 593 aaPredicted RBP11.69□□□□□ -0.54
VANGL1-206ENST00000478369 PCDHB5Q9Y5E4 795 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 SCN1AP35498 2009 aa11.69□□□□□ -0.54
VANGL1-206ENST00000478369 RIF1Q5UIP0 2472 aaKnown RBP11.68□□□□□ -0.54
VANGL1-206ENST00000478369 ZNF233A6NK53 670 aa11.68□□□□□ -0.54
VANGL1-206ENST00000478369 SOBPA7XYQ1 873 aa11.68□□□□□ -0.54
VANGL1-206ENST00000478369 HEPACAM2A8MVW5 462 aa11.68□□□□□ -0.54
VANGL1-206ENST00000478369 NRG2O14511 850 aaPredicted RBP11.68□□□□□ -0.54
VANGL1-206ENST00000478369 DPYSL4O14531 572 aa11.68□□□□□ -0.54
VANGL1-206ENST00000478369 LRRN2O75325 713 aa11.68□□□□□ -0.54
VANGL1-206ENST00000478369 PRPF6O94906 941 aaKnown RBP11.68□□□□□ -0.54
VANGL1-206ENST00000478369 ITGB3P05106 788 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms