RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 DENND1BQ6P3S1 775 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 DDX27Q96GQ7 796 aaKnown RBP12.93□□□□□ -0.34
PRPF39-203ENST00000477626 TJP2Q9UDY2 1190 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 NEU2Q9Y3R4 380 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 NR2E1Q9Y466 385 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 A0A1W2PQ45 241 aaPredicted RBP12.93□□□□□ -0.34
PRPF39-203ENST00000477626 A0A1W2PQY0 241 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 INHAP05111 366 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 WEE2P0C1S8 567 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 RRM1P23921 792 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 PRMT2P55345 433 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 KLF1Q13351 362 aaPredicted RBP12.93□□□□□ -0.34
PRPF39-203ENST00000477626 TAF3Q5VWG9 929 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 SLAIN1Q8ND83 568 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 RPGRIP1Q96KN7 1286 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
PRPF39-203ENST00000477626 PARD6BQ9BYG5 372 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 CRISPLD2Q9H0B8 497 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 RBM12Q9NTZ6 932 aaKnown RBP12.93□□□□□ -0.34
PRPF39-203ENST00000477626 CHORDC1Q9UHD1 332 aaPredicted RBP12.93□□□□□ -0.34
PRPF39-203ENST00000477626 ST3GAL5Q9UNP4 418 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 ALG6Q9Y672 507 aa12.93□□□□□ -0.34
PRPF39-203ENST00000477626 TMEM191CA6NGB0 347 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 TMEM191BP0C7N4 346 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 HSPA6P17066 643 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 TFAMQ00059 246 aaKnown RBP12.92□□□□□ -0.34
PRPF39-203ENST00000477626 C3orf58Q8NDZ4 430 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 HDAC7Q8WUI4 952 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 CPA5Q8WXQ8 436 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 ALS2CR12Q96Q35 445 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 TRMT13Q9NUP7 481 aaKnown RBP12.92□□□□□ -0.34
PRPF39-203ENST00000477626 TTC3P53804 2025 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 MAP2K7O14733 419 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 B4GALT3O60512 393 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 CABYRO75952 493 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 PTPN20Q4JDL3 420 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 LCLAT1Q6UWP7 414 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 VPS36Q86VN1 386 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 MCRS1Q96EZ8 462 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 HPDLQ96IR7 371 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 RTP3Q9BQQ7 232 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 CARD9Q9H257 536 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 GDF3Q9NR23 364 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 OGDHLQ9ULD0 1010 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 ERLIN2O94905 339 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 BRD2P25440 801 aaKnown RBP12.92□□□□□ -0.34
PRPF39-203ENST00000477626 CLCN6P51797 869 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 C1QTNF8P60827 252 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 TUBB4BP68371 445 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 ITGA7Q13683 1181 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 CRYBG2Q8N1P7 616 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 GOLGA1Q92805 767 aa12.92□□□□□ -0.34
PRPF39-203ENST00000477626 BARX2Q9UMQ3 279 aaPredicted RBP12.92□□□□□ -0.34
PRPF39-203ENST00000477626 SASH3O75995 380 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 TNNC2P02585 160 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 MYBL2P10244 700 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 AKAP5P24588 427 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 CXCR5P32302 372 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 BIRC3Q13489 604 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 BEND6Q5SZJ8 279 aaPredicted RBP12.91□□□□□ -0.34
PRPF39-203ENST00000477626 ARHGAP17Q68EM7 881 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 PAQR9Q6ZVX9 377 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 DNAJC5GQ8N7S2 189 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 C12orf50Q8NA57 414 aaPredicted RBP12.91□□□□□ -0.34
PRPF39-203ENST00000477626 BTBD6Q96KE9 485 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 NUP85Q9BW27 656 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 PCDHB4Q9Y5E5 795 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 REV3LO60673 3130 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 RBP5P82980 135 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 ZNF618Q5T7W0 954 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 XYLT1Q86Y38 959 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 FAM126BQ8IXS8 530 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 PBKQ96KB5 322 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 ADAM33Q9BZ11 813 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 LUC7LQ9NQ29 371 aaKnown RBP12.91□□□□□ -0.34
PRPF39-203ENST00000477626 PLXNA4Q9HCM2 1894 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 CKBP12277 381 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 WARSP23381 471 aaKnown RBP12.91□□□□□ -0.34
PRPF39-203ENST00000477626 PTPN7P35236 360 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 ARSEP51690 589 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 CNGA2Q16280 664 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 PTGISQ16647 500 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 CATSPER4Q7RTX7 472 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 ZNF564Q8TBZ8 553 aaPredicted RBP12.91□□□□□ -0.34
PRPF39-203ENST00000477626 TMEM176AQ96HP8 235 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 FAM105AQ9NUU6 356 aa12.91□□□□□ -0.34
PRPF39-203ENST00000477626 PUF60Q9UHX1 559 aaKnown RBP12.91□□□□□ -0.34
PRPF39-203ENST00000477626 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 IPO7O95373 1038 aaKnown RBP12.9□□□□□ -0.34
PRPF39-203ENST00000477626 ERBB2P04626 1255 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 COL6A1P12109 1028 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 COMTP21964 271 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 NAA35Q5VZE5 725 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 TTC30AQ86WT1 665 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 SLC35F5Q8WV83 523 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 CPXM1Q96SM3 734 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 RGS18Q9NS28 235 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 PTCH2Q9Y6C5 1203 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 HCRTO43612 131 aa12.9□□□□□ -0.34
PRPF39-203ENST00000477626 VSNL1P62760 191 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms