RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 LINC01565O15544 149 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 TGM5O43548 720 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 TACC1O75410 805 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 ABLIM3O94929 683 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 CLSTN1O94985 981 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 GLP2RO95838 553 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 EPCAMP16422 314 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 KCNA5P22460 613 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 PCSK1P29120 753 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 ELF1P32519 619 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 LTBRP36941 435 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 TSPY1Q01534 308 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 ROR1Q01973 937 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 NFKBIBQ15653 356 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 SOWAHAQ2M3V2 549 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 UVSSAQ2YD98 709 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 WDR44Q5JSH3 913 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 ANKRD54Q6NXT1 300 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 LLGL2Q6P1M3 1020 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 CYP26C1Q6V0L0 522 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 ADGRF2Q8IZF7 708 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 KREMEN2Q8NCW0 462 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 VN1R2Q8NFZ6 395 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 TAS1R2Q8TE23 839 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 CNOT6LQ96LI5 555 aaKnown RBP14.07□□□□□ -0.16
TOP3A-205ENST00000477508 ACBD6Q9BR61 282 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 DNAI2Q9GZS0 605 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 FAM124BQ9H5Z6 455 aaPredicted RBP14.07□□□□□ -0.16
TOP3A-205ENST00000477508 MMRN2Q9H8L6 949 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 RAB20Q9NX57 234 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 NXF1Q9UBU9 619 aaKnown RBP14.07□□□□□ -0.16
TOP3A-205ENST00000477508 L1RE1Q9UN81 338 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 PRUNE2Q8WUY3 3088 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 REV3LO60673 3130 aa14.07□□□□□ -0.16
TOP3A-205ENST00000477508 MTCL1Q9Y4B5 1905 aaKnown RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 GABRDO14764 452 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 ADAM12O43184 909 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 TBX10O75333 385 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 CAVIN2O95810 425 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 AFPP02771 609 aaKnown RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 CPB1P15086 417 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 ATF2P15336 505 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 WARSP23381 471 aaKnown RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 EEF1GP26641 437 aaKnown RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 MTIF2P46199 727 aaKnown RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 FMO5P49326 533 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 MYL5Q02045 173 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 ITIH3Q06033 890 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 KCNH2Q12809 1159 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 GPR17Q13304 367 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 LEXMQ3ZCV2 418 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 LIN9Q5TKA1 542 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 RSPO2Q6UXX9 243 aaPredicted RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 CCDC149Q6ZUS6 474 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 GLYCTKQ8IVS8 523 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 DCP1BQ8IZD4 617 aaKnown RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 TTC39CQ8N584 583 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 CMASQ8NFW8 434 aaPredicted RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 C2orf15Q8WU43 125 aaKnown RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 MSLNLQ96KJ4 702 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 BPIFA3Q9BQP9 254 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 RHOBTB2Q9BYZ6 727 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 SNX25Q9H3E2 840 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 SFXN1Q9H9B4 322 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 CYP3A43Q9HB55 503 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 MAN1C1Q9NR34 630 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 ZDHHC7Q9NXF8 308 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 DDX43Q9NXZ2 648 aaKnown RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 CLEC1BQ9P126 229 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 AFF4Q9UHB7 1163 aaKnown RBP14.06□□□□□ -0.16
TOP3A-205ENST00000477508 CD207Q9UJ71 328 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 FBXW11Q9UKB1 542 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 NFE2L3Q9Y4A8 694 aa14.06□□□□□ -0.16
TOP3A-205ENST00000477508 HNRNPA1P09651 372 aaKnown RBP eCLIP14.05□□□□□ -0.16
TOP3A-205ENST00000477508 TRIM21P19474 475 aaKnown RBP14.05□□□□□ -0.16
TOP3A-205ENST00000477508 HOXA9P31269 272 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 GNL1P36915 607 aaPredicted RBP14.05□□□□□ -0.16
TOP3A-205ENST00000477508 ARPP19P56211 112 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 NOP14P78316 857 aaKnown RBP14.05□□□□□ -0.16
TOP3A-205ENST00000477508 MRPS5P82675 430 aaKnown RBP14.05□□□□□ -0.16
TOP3A-205ENST00000477508 GSE1Q14687 1217 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 MAPRE1Q15691 268 aaKnown RBP14.05□□□□□ -0.16
TOP3A-205ENST00000477508 NFE2Q16621 373 aaPredicted RBP14.05□□□□□ -0.16
TOP3A-205ENST00000477508 CBWD6Q4V339 395 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 CBWD3Q5JTY5 395 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 CBWD5Q5RIA9 395 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 SCARA3Q6AZY7 606 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 CES5AQ6NT32 575 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 IRF2BP1Q8IU81 584 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 CREBRFQ8IUR6 639 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 NIF3L1Q9GZT8 377 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 ZCWPW1Q9H0M4 648 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 DNAJC25Q9H1X3 360 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 HSFX1Q9UBD0 423 aa14.05□□□□□ -0.16
TOP3A-205ENST00000477508 BARX2Q9UMQ3 279 aaPredicted RBP14.05□□□□□ -0.16
TOP3A-205ENST00000477508 SYCE3A1L190 88 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 WDR27A2RRH5 827 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 SMTNL1A8MU46 457 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 PRRG1O14668 218 aa14.04□□□□□ -0.16
TOP3A-205ENST00000477508 ZMYND10O75800 440 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms