RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 BSNDQ8WZ55 320 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 ZBTB10Q96DT7 871 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 KLC4Q9NSK0 619 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 CYP39A1Q9NYL5 469 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 TPX2Q9ULW0 747 aaKnown RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 PHRF1Q9P1Y6 1649 aaKnown RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 LRP6O75581 1613 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 IQANK1A0A1B0GTG1 560 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 KRT37O76014 449 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 TNFSF9P41273 254 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 TNFAIP2Q03169 654 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 LAMTOR4Q0VGL1 99 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 AP1B1Q10567 949 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 MYBPC2Q14324 1141 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 PIGHQ14442 188 aaPredicted RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 STAT4Q14765 748 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 BMT2Q1RMZ1 405 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 MFSD7Q6UXD7 560 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 KDELC2Q7Z4H8 507 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 SPATA21Q7Z572 469 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 ACTL9Q8TC94 416 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 SCFD2Q8WU76 684 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 WNK4Q96J92 1243 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 KLHL8Q9P2G9 620 aaPredicted RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 PPARGC1AQ9UBK2 798 aaKnown RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 COG5Q9UP83 839 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 MAPK13O15264 365 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 NPTXRO95502 500 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 SLC8A1P32418 973 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 SNRPFP62306 86 aaKnown RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 ACOT1Q86TX2 421 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 DAW1Q8N136 415 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 SLC16A10Q8TF71 515 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 RAB3IPQ96QF0 476 aaPredicted RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 NEUROG2Q9H2A3 272 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 ECT2Q9H8V3 914 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 ERAP1Q9NZ08 941 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 XPO7Q9UIA9 1087 aaKnown RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 POLIQ9UNA4 740 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 MYH13Q9UKX3 1938 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 AGPSO00116 658 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 KIAA0391O15091 583 aaKnown RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 RPL7AP62424 266 aaKnown RBP11.6□□□□□ -0.55
COL27A1-204ENST00000477421 OVGP1Q12889 678 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 MCUQ8NE86 351 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 BEST2Q8NFU1 509 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 SHC3Q92529 594 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 VPS11Q9H270 941 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 NPHS2Q9NP85 383 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 PCDHA2Q9Y5H9 948 aa11.6□□□□□ -0.55
COL27A1-204ENST00000477421 ZNF862O60290 1169 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 LPXNO60711 386 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 ZNF286BP0CG31 522 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 ESRRAP11474 423 aaPredicted RBP11.59□□□□□ -0.55
COL27A1-204ENST00000477421 OTUD4Q01804 1114 aaKnown RBP11.59□□□□□ -0.55
COL27A1-204ENST00000477421 KIF22Q14807 665 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 FAM182AQ5T1J6 154 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 HEATR6Q6AI08 1181 aaKnown RBP11.59□□□□□ -0.55
COL27A1-204ENST00000477421 FAM71AQ8IYT1 594 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 IQCKQ8N0W5 287 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 HES6Q96HZ4 224 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 DDX56Q9NY93 547 aaKnown RBP11.59□□□□□ -0.55
COL27A1-204ENST00000477421 ALS2Q96Q42 1657 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 CYP2C8P10632 490 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 ETS1P14921 441 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 UBA1P22314 1058 aaKnown RBP11.59□□□□□ -0.55
COL27A1-204ENST00000477421 GLRA2P23416 452 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 HOXD13P35453 343 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 CTCFP49711 727 aaPredicted RBP11.59□□□□□ -0.55
COL27A1-204ENST00000477421 AP3M2P53677 418 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 ASTE1Q2TB18 679 aaPredicted RBP11.59□□□□□ -0.55
COL27A1-204ENST00000477421 ZBTB41Q5SVQ8 909 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 FKBP1CQ5VVH2 108 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 C11orf63Q6NUN7 778 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 TRPM4Q8TD43 1214 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 AFG1LQ8WV93 481 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 TTC25Q96NG3 672 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 TRIM55Q9BYV6 548 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 DNPEPQ9ULA0 475 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 PCDHA3Q9Y5H8 950 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 DCDC2CA8MYV0 355 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 RBAK-RBAKDNI3L0D1 243 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 IRF6O14896 467 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 RBP5P82980 135 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 MAP7D1Q3KQU3 841 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 MDH1BQ5I0G3 518 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 ARMCX2Q7L311 632 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 OR6J1Q8NGC5 347 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 ERP27Q96DN0 273 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 CGRRF1Q99675 332 aa11.59□□□□□ -0.55
COL27A1-204ENST00000477421 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
COL27A1-204ENST00000477421 USP15Q9Y4E8 981 aaPredicted RBP11.59□□□□□ -0.55
COL27A1-204ENST00000477421 FAM47DPA6NHR8 397 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 ASB14A6NK59 587 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 FOXO6A8MYZ6 492 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 OPLAHO14841 1288 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 HBP1O60381 514 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 INSRRP14616 1297 aa11.58□□□□□ -0.56
COL27A1-204ENST00000477421 NCF2P19878 526 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms