RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 LLGL2Q6P1M3 1020 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 EHBP1Q8NDI1 1231 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 OR10T2Q8NGX3 314 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 KAT5Q92993 513 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 ARID3AQ99856 593 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 NDST4Q9H3R1 872 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 NSUN3Q9H649 340 aaKnown RBP17.03■□□□□ 0.32
COPS3-207ENST00000477299 TLE6Q9H808 572 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 VRTNQ9H8Y1 702 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 MTRRQ9UBK8 725 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 LIMA1Q9UHB6 759 aaKnown RBP17.03■□□□□ 0.32
COPS3-207ENST00000477299 HUS1O60921 280 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 ATP2C2O75185 946 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 VNN2O95498 520 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 PDGFRBP09619 1106 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 EPCAMP16422 314 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 CDK11BP21127 795 aaKnown RBP17.02■□□□□ 0.32
COPS3-207ENST00000477299 ASPAP45381 313 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 YWHAHQ04917 246 aaPredicted RBP17.02■□□□□ 0.32
COPS3-207ENST00000477299 ORC1Q13415 861 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 DUSP6Q16828 381 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 CTXN3Q4LDR2 81 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 DPY19L2P1Q6NXN4 242 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 GJB7Q6PEY0 223 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 LRRTM3Q86VH5 581 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 ARHGEF19Q8IW93 802 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 APPL2Q8NEU8 664 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 FAM200AQ8TCP9 573 aa17.02■□□□□ 0.32
COPS3-207ENST00000477299 COL6A3P12111 3177 aa17.02■□□□□ 0.31
COPS3-207ENST00000477299 MYH10P35580 1976 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 BECN2A8MW95 431 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 PES1O00541 588 aaKnown RBP17.01■□□□□ 0.31
COPS3-207ENST00000477299 PMM2O15305 246 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 GLP2RO95838 553 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 KLRC2P26717 231 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 KLK7P49862 253 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 TNNC1P63316 161 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 DLX2Q07687 328 aaPredicted RBP17.01■□□□□ 0.31
COPS3-207ENST00000477299 PDE12Q6L8Q7 609 aaKnown RBP17.01■□□□□ 0.31
COPS3-207ENST00000477299 ANKS3Q6ZW76 656 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 ADGRF2Q8IZF7 708 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 TOP6BLQ8N6T0 577 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 SLC22A17Q8WUG5 538 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 TAF4BQ92750 862 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 NAP1L5Q96NT1 182 aaPredicted RBP17.01■□□□□ 0.31
COPS3-207ENST00000477299 INTS2Q9H0H0 1204 aaKnown RBP17.01■□□□□ 0.31
COPS3-207ENST00000477299 PRDM6Q9NQX0 595 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 TMLHEQ9NVH6 421 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 HMGXB4Q9UGU5 601 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 AJAP1Q9UKB5 411 aaPredicted RBP17.01■□□□□ 0.31
COPS3-207ENST00000477299 BACE2Q9Y5Z0 518 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 PTPRDP23468 1912 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 EYSQ5T1H1 3165 aa17.01■□□□□ 0.31
COPS3-207ENST00000477299 WDR27A2RRH5 827 aa17■□□□□ 0.31
COPS3-207ENST00000477299 LRRC10BA6NIK2 292 aa17■□□□□ 0.31
COPS3-207ENST00000477299 GABRDO14764 452 aa17■□□□□ 0.31
COPS3-207ENST00000477299 TEX33O43247 280 aa17■□□□□ 0.31
COPS3-207ENST00000477299 KCNC3Q14003 757 aa17■□□□□ 0.31
COPS3-207ENST00000477299 PHLDB3Q6NSJ2 640 aa17■□□□□ 0.31
COPS3-207ENST00000477299 LILRA6Q6PI73 481 aa17■□□□□ 0.31
COPS3-207ENST00000477299 RRAGAQ7L523 313 aa17■□□□□ 0.31
COPS3-207ENST00000477299 TWNKQ96RR1 684 aa17■□□□□ 0.31
COPS3-207ENST00000477299 BCO2Q9BYV7 579 aa17■□□□□ 0.31
COPS3-207ENST00000477299 DPEP3Q9H4B8 488 aa17■□□□□ 0.31
COPS3-207ENST00000477299 SIX2Q9NPC8 291 aa17■□□□□ 0.31
COPS3-207ENST00000477299 DDX43Q9NXZ2 648 aaKnown RBP17■□□□□ 0.31
COPS3-207ENST00000477299 FNIP2Q9P278 1114 aa17■□□□□ 0.31
COPS3-207ENST00000477299 C2orf16Q68DN1 1984 aa17■□□□□ 0.31
COPS3-207ENST00000477299 H7C4K7 107 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 P4HA2O15460 535 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 TGM5O43548 720 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 N4BP1O75113 896 aaKnown RBP16.99■□□□□ 0.31
COPS3-207ENST00000477299 CALCAP01258 141 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 CD58P19256 250 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 WARSP23381 471 aaKnown RBP16.99■□□□□ 0.31
COPS3-207ENST00000477299 PAX3P23760 479 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 PON1P27169 355 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 LTBRP36941 435 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 CLCN4P51793 760 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 PSMC1P62191 440 aaKnown RBP16.99■□□□□ 0.31
COPS3-207ENST00000477299 ROR1Q01973 937 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 ADAM15Q13444 863 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 ZNF280DQ6N043 979 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 RNF19BQ6ZMZ0 732 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 METTL23Q86XA0 190 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 OR6B3Q8NGW1 331 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 WHAMMQ8TF30 809 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 PGLYRP2Q96PD5 576 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 EMILIN2Q9BXX0 1053 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 NIF3L1Q9GZT8 377 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 RBSNQ9H1K0 784 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 CRISPLD1Q9H336 500 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 CRTAC1Q9NQ79 661 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 GCNT4Q9P109 453 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 SSX2IPQ9Y2D8 614 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 HCFC2Q9Y5Z7 792 aa16.99■□□□□ 0.31
COPS3-207ENST00000477299 MYBPHLA2RUH7 354 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 TACC1O75410 805 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 SEC24AO95486 1093 aa16.98■□□□□ 0.31
COPS3-207ENST00000477299 GNL1P36915 607 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms