RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CFAP99D6REC4 459 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 AIM2O14862 343 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 ZNF185O15231 689 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 DGKIO75912 1065 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 GALNT4Q8N4A0 578 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 GIMAP4Q9NUV9 329 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 CDYLQ9Y232 598 aa19.41■□□□□ 0.7
VARS2-209ENST00000477288 USP27XA6NNY8 438 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 KIF2CQ99661 725 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 STK33Q9BYT3 514 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 ABI2Q9NYB9 513 aaPredicted RBP19.4■□□□□ 0.7
VARS2-209ENST00000477288 PLA2G4AP47712 749 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 RPS6P62753 249 aaKnown RBP19.4■□□□□ 0.7
VARS2-209ENST00000477288 L3MBTL3Q96JM7 780 aaPredicted RBP19.4■□□□□ 0.7
VARS2-209ENST00000477288 DBR1Q9UK59 544 aaKnown RBP19.4■□□□□ 0.7
VARS2-209ENST00000477288 PNMA8BQ9ULN7 279 aaPredicted RBP19.4■□□□□ 0.7
VARS2-209ENST00000477288 SETBP1Q9Y6X0 1596 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 CRB1P82279 1406 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 RFX7Q2KHR2 1363 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 H0YC42 278 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 WEE2P0C1S8 567 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 FMO5P49326 533 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 PIGHQ14442 188 aaPredicted RBP19.4■□□□□ 0.7
VARS2-209ENST00000477288 TERF2Q15554 542 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 UGP2Q16851 508 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 RNF180Q86T96 592 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 ERAP1Q9NZ08 941 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 RGS4P49798 205 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 PRR5LQ6MZQ0 368 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 C10orf53Q8N6V4 93 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 SCFD2Q8WU76 684 aa19.4■□□□□ 0.7
VARS2-209ENST00000477288 MOV10L1Q9BXT6 1211 aaKnown RBP19.4■□□□□ 0.7
VARS2-209ENST00000477288 A0A1W2PQC6 194 aa19.39■□□□□ 0.7
VARS2-209ENST00000477288 NCAM1P13591 858 aa19.39■□□□□ 0.7
VARS2-209ENST00000477288 ACADSBP45954 432 aa19.39■□□□□ 0.7
VARS2-209ENST00000477288 ALDH7A1P49419 539 aaKnown RBP19.39■□□□□ 0.7
VARS2-209ENST00000477288 SF3B3Q15393 1217 aaKnown RBP19.39■□□□□ 0.7
VARS2-209ENST00000477288 TDRD10Q5VZ19 366 aaKnown RBP19.39■□□□□ 0.7
VARS2-209ENST00000477288 IYDQ6PHW0 289 aa19.39■□□□□ 0.7
VARS2-209ENST00000477288 EME1Q96AY2 570 aa19.39■□□□□ 0.7
VARS2-209ENST00000477288 C16orf96A6NNT2 1141 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 FCGRTP55899 365 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 KCNB1Q14721 858 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 SGMS1Q86VZ5 419 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 SLITRK1Q96PX8 696 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 TMEM245Q9H330 911 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 CDC42BPBQ9Y5S2 1711 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 ENTPD3O75355 529 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 VCPKMTQ9H867 229 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 MYOZ2Q9NPC6 264 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 CHRM3P20309 590 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 SERPINB4P48594 390 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 LAYNQ6UX15 382 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 TRIM69Q86WT6 500 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 CDR2LQ86X02 465 aaPredicted RBP19.39■□□□□ 0.69
VARS2-209ENST00000477288 BBS7Q8IWZ6 715 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 CHMP2BQ9UQN3 213 aa19.39■□□□□ 0.69
VARS2-209ENST00000477288 LMTK2Q8IWU2 1503 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 NBPF26B4DH59 902 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 RFX3P48380 749 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 BTKQ06187 659 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 CDH18Q13634 790 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 ZC2HC1CQ53FD0 456 aaPredicted RBP19.38■□□□□ 0.69
VARS2-209ENST00000477288 SYDE1Q6ZW31 735 aaPredicted RBP19.38■□□□□ 0.69
VARS2-209ENST00000477288 NBPF15Q8N660 670 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 LRRC1Q9BTT6 524 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 TMEM39BQ9GZU3 492 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 OLFML3Q9NRN5 406 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 C17orf102A2RUQ5 167 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 THPOP40225 353 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 NOTUMQ6P988 496 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 RBM15Q96T37 977 aaKnown RBP eCLIP19.38■□□□□ 0.692e-10■■□□□ 13.6
VARS2-209ENST00000477288 AAASQ9NRG9 546 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 NYAP2Q9P242 653 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 SPASTQ9UBP0 616 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 LRRC7Q96NW7 1537 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 HLA-DRAP01903 254 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 RUNX1T1Q06455 604 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 C16orf89Q6UX73 402 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 KRT35Q92764 455 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 AGBL1Q96MI9 1066 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 DMAP1Q9NPF5 467 aaPredicted RBP19.38■□□□□ 0.69
VARS2-209ENST00000477288 CHN1P15882 459 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 ZNF200P98182 395 aaPredicted RBP19.38■□□□□ 0.69
VARS2-209ENST00000477288 MTM1Q13496 603 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 CCDC144BQ3MJ40 725 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 CEP78Q5JTW2 689 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 CINPQ9BW66 212 aaPredicted RBP19.38■□□□□ 0.69
VARS2-209ENST00000477288 UVRAGQ9P2Y5 699 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 ABCA9Q8IUA7 1624 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 MLNP12872 115 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 TRIM9Q9C026 710 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 FBXO2Q9UK22 296 aaPredicted RBP19.38■□□□□ 0.69
VARS2-209ENST00000477288 NEU2Q9Y3R4 380 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 ABCA6Q8N139 1617 aa19.38■□□□□ 0.69
VARS2-209ENST00000477288 CLASP2O75122 1294 aaKnown RBP19.37■□□□□ 0.69
VARS2-209ENST00000477288 CCDC15Q0P6D6 951 aa19.37■□□□□ 0.69
VARS2-209ENST00000477288 MTFR1Q15390 333 aa19.37■□□□□ 0.69
VARS2-209ENST00000477288 ZCCHC17Q9NP64 241 aaKnown RBP19.37■□□□□ 0.69
VARS2-209ENST00000477288 KLK14Q9P0G3 267 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms