RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 THG1LQ9NWX6 298 aaKnown RBP16.81■□□□□ 0.28
SMG5-204ENST00000476954 TPCN1Q9ULQ1 816 aa16.81■□□□□ 0.28
SMG5-204ENST00000476954 MAFFQ9ULX9 164 aa16.81■□□□□ 0.28
SMG5-204ENST00000476954 TIMM13Q9Y5L4 95 aaPredicted RBP16.81■□□□□ 0.28
SMG5-204ENST00000476954 MYO18BQ8IUG5 2567 aa16.81■□□□□ 0.28
SMG5-204ENST00000476954 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 CCNT1O60563 726 aaKnown RBP16.8■□□□□ 0.28
SMG5-204ENST00000476954 DRD1P21728 446 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 MCM4P33991 863 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 C19orf57Q0VDD7 668 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 RNF20Q5VTR2 975 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 PPP4R3AQ6IN85 833 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 ALKAL1Q6UXT8 129 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 TMEFF1Q8IYR6 380 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 RLN3Q8WXF3 142 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 CAMK1GQ96NX5 476 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 GTPBP2Q9BX10 602 aaKnown RBP16.8■□□□□ 0.28
SMG5-204ENST00000476954 SLC46A2Q9BY10 475 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 TASP1Q9H6P5 420 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 POLD4Q9HCU8 107 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 KCNJ14Q9UNX9 436 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 PCDH15Q96QU1 1955 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 CEP192Q8TEP8 1941 aa16.8■□□□□ 0.28
SMG5-204ENST00000476954 UPK3BL1B0FP48 263 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 UPK3BL2E5RIL1 263 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 RDXP35241 583 aaKnown RBP16.79■□□□□ 0.28
SMG5-204ENST00000476954 PLD1Q13393 1074 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 ZNF423Q2M1K9 1284 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 ARHGAP15Q53QZ3 475 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 XKR4Q5GH76 650 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 CCNI2Q6ZMN8 369 aaPredicted RBP16.79■□□□□ 0.28
SMG5-204ENST00000476954 KRT25Q7Z3Z0 450 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 NEK8Q86SG6 692 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 TTC30AQ86WT1 665 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 ATAD1Q8NBU5 361 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 PSMG2Q969U7 264 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 LPIN3Q9BQK8 851 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 IL21Q9HBE4 155 aa16.79■□□□□ 0.28
SMG5-204ENST00000476954 OBSL1O75147 1896 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 WEE1P30291 646 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 GJA4P35212 333 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 ALDH1A3P47895 512 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 ATF7IP2Q5U623 682 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 LARP1BQ659C4 914 aaKnown RBP16.78■□□□□ 0.28
SMG5-204ENST00000476954 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
SMG5-204ENST00000476954 CENPPQ6IPU0 288 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 C11orf74Q86VG3 221 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 RASSF3Q86WH2 238 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 APPL2Q8NEU8 664 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 MDGA1Q8NFP4 955 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 ACDQ96AP0 544 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 FNBP1Q96RU3 617 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 C2orf40Q9H1Z8 148 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 SCUBE2Q9NQ36 999 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 TBX20Q9UMR3 447 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 PCDHB8Q9UN66 801 aa16.78■□□□□ 0.28
SMG5-204ENST00000476954 FAM205CA6NFA0 338 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 CFIP05156 583 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 CD59P13987 128 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 PLA2G2AP14555 144 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 HNRNPLP14866 589 aaKnown RBP eCLIP16.77■□□□□ 0.28
SMG5-204ENST00000476954 TSGA10IPQ3SY00 556 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 FBXO43Q4G163 708 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 SLC23A3Q6PIS1 610 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 SYT12Q8IV01 421 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 HDDC3Q8N4P3 179 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 DEPTORQ8TB45 409 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 ADAMTS14Q8WXS8 1223 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 USP13Q92995 863 aaPredicted RBP16.77■□□□□ 0.28
SMG5-204ENST00000476954 CNOT6LQ96LI5 555 aaKnown RBP16.77■□□□□ 0.28
SMG5-204ENST00000476954 SLC38A7Q9NVC3 462 aa16.77■□□□□ 0.28
SMG5-204ENST00000476954 CIZ1Q9ULV3 898 aaPredicted RBP16.77■□□□□ 0.28
SMG5-204ENST00000476954 ANK1P16157 1881 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 MTMR11A4FU01 709 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 TNFRSF10BO14763 440 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 GCFC2P16383 781 aaKnown RBP16.76■□□□□ 0.27
SMG5-204ENST00000476954 ATP2B1P20020 1258 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 ITPKAP23677 461 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 MARCKSP29966 332 aaPredicted RBP16.76■□□□□ 0.27
SMG5-204ENST00000476954 GRM5P41594 1212 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 YARSP54577 528 aaKnown RBP16.76■□□□□ 0.27
SMG5-204ENST00000476954 GPR17Q13304 367 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 EARS2Q5JPH6 523 aaKnown RBP16.76■□□□□ 0.27
SMG5-204ENST00000476954 CMTM8Q8IZV2 173 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 CCDC33Q8N5R6 958 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 OLIG1Q8TAK6 271 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 CD101Q93033 1021 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 CDT1Q9H211 546 aa16.76■□□□□ 0.27
SMG5-204ENST00000476954 HELZP42694 1942 aaKnown RBP16.76■□□□□ 0.27
SMG5-204ENST00000476954 GOLGA4Q13439 2230 aaKnown RBP16.76■□□□□ 0.27
SMG5-204ENST00000476954 OAZ2O95190 189 aa16.75■□□□□ 0.27
SMG5-204ENST00000476954 FTH1P19P0C7X4 201 aa16.75■□□□□ 0.27
SMG5-204ENST00000476954 KCNE1P15382 129 aa16.75■□□□□ 0.27
SMG5-204ENST00000476954 PDIA3P30101 505 aaKnown RBP16.75■□□□□ 0.27
SMG5-204ENST00000476954 NMT1P30419 496 aaKnown RBP16.75■□□□□ 0.27
SMG5-204ENST00000476954 RPL9P32969 192 aaKnown RBP16.75■□□□□ 0.27
SMG5-204ENST00000476954 SEC13P55735 322 aa16.75■□□□□ 0.27
SMG5-204ENST00000476954 YWHAHQ04917 246 aaPredicted RBP16.75■□□□□ 0.27
SMG5-204ENST00000476954 TRIP6Q15654 476 aaKnown RBP16.75■□□□□ 0.27
SMG5-204ENST00000476954 C2orf27AQ580R0 203 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms