RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 SKIV2LQ15477 1246 aaKnown RBP18.13■□□□□ 0.49
RPN1-202ENST00000476931 CBWD6Q4V339 395 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 CBWD3Q5JTY5 395 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 CBWD5Q5RIA9 395 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 CDKAL1Q5VV42 579 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 SCARA3Q6AZY7 606 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 LILRA6Q6PI73 481 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 HLA-CQ95604 372 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 TUBGCP2Q9BSJ2 902 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 SAMSN1Q9NSI8 373 aaKnown RBP18.13■□□□□ 0.49
RPN1-202ENST00000476931 FANCLQ9NW38 375 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 NXF1Q9UBU9 619 aaKnown RBP18.13■□□□□ 0.49
RPN1-202ENST00000476931 L1RE1Q9UN81 338 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 CDY1Q9Y6F8 540 aa18.13■□□□□ 0.49
RPN1-202ENST00000476931 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.12■□□□□ 0.49
RPN1-202ENST00000476931 GTPBP10A4D1E9 387 aaKnown RBP18.12■□□□□ 0.49
RPN1-202ENST00000476931 LRRC10BA6NIK2 292 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 ABLIM3O94929 683 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 CLSTN1O94985 981 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 TRIM21P19474 475 aaKnown RBP18.12■□□□□ 0.49
RPN1-202ENST00000476931 CDK11BP21127 795 aaKnown RBP18.12■□□□□ 0.49
RPN1-202ENST00000476931 WARSP23381 471 aaKnown RBP18.12■□□□□ 0.49
RPN1-202ENST00000476931 GNL1P36915 607 aaPredicted RBP18.12■□□□□ 0.49
RPN1-202ENST00000476931 TPM4P67936 248 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 GPR17Q13304 367 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 UVSSAQ2YD98 709 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 SMYD5Q6GMV2 418 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 DCP1BQ8IZD4 617 aaKnown RBP18.12■□□□□ 0.49
RPN1-202ENST00000476931 ADGRF2Q8IZF7 708 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 EHBP1Q8NDI1 1231 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 C2orf15Q8WU43 125 aaKnown RBP18.12■□□□□ 0.49
RPN1-202ENST00000476931 PPM1EQ8WY54 764 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 FAM81BQ96LP2 452 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 SNX25Q9H3E2 840 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 DZANK1Q9NVP4 752 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 HCFC2Q9Y5Z7 792 aa18.12■□□□□ 0.49
RPN1-202ENST00000476931 SCN1AP35498 2009 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 ATF2P15336 505 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 RPL17P18621 184 aaKnown RBP18.11■□□□□ 0.49
RPN1-202ENST00000476931 NOP14P78316 857 aaKnown RBP18.11■□□□□ 0.49
RPN1-202ENST00000476931 TSPY1Q01534 308 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 NCAPHQ15003 741 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 VWA3BQ502W6 1294 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 PALB2Q86YC2 1186 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 SEMA4DQ92854 862 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 ANP32EQ9BTT0 268 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 NDST4Q9H3R1 872 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 DDX43Q9NXZ2 648 aaKnown RBP18.11■□□□□ 0.49
RPN1-202ENST00000476931 CLDND1Q9NY35 253 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 HSFX1Q9UBD0 423 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 CDH9Q9ULB4 789 aa18.11■□□□□ 0.49
RPN1-202ENST00000476931 COL4A4P53420 1690 aaPredicted RBP18.1■□□□□ 0.49
RPN1-202ENST00000476931 TGM5O43548 720 aa18.1■□□□□ 0.49
RPN1-202ENST00000476931 ELF1P32519 619 aa18.1■□□□□ 0.49
RPN1-202ENST00000476931 MAPRE1Q15691 268 aaKnown RBP18.1■□□□□ 0.49
RPN1-202ENST00000476931 NFE2Q16621 373 aaPredicted RBP18.1■□□□□ 0.49
RPN1-202ENST00000476931 RSPO2Q6UXX9 243 aaPredicted RBP18.1■□□□□ 0.49
RPN1-202ENST00000476931 CYP26C1Q6V0L0 522 aa18.1■□□□□ 0.49
RPN1-202ENST00000476931 GBP6Q6ZN66 633 aa18.1■□□□□ 0.49
RPN1-202ENST00000476931 CCDC149Q6ZUS6 474 aa18.1■□□□□ 0.49
RPN1-202ENST00000476931 UNC93AQ86WB7 457 aa18.1■□□□□ 0.49
RPN1-202ENST00000476931 AOPEPQ8N6M6 819 aa18.1■□□□□ 0.49
RPN1-202ENST00000476931 BCO2Q9BYV7 579 aa18.1■□□□□ 0.49
RPN1-202ENST00000476931 NIF3L1Q9GZT8 377 aa18.1■□□□□ 0.49
RPN1-202ENST00000476931 ZCWPW1Q9H0M4 648 aa18.1■□□□□ 0.49
RPN1-202ENST00000476931 AFF4Q9UHB7 1163 aaKnown RBP18.1■□□□□ 0.49
RPN1-202ENST00000476931 CPB1P15086 417 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 ZNF18P17022 549 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 TBXAS1P24557 533 aaPredicted RBP18.09■□□□□ 0.49
RPN1-202ENST00000476931 GTF2F1P35269 517 aaKnown RBP eCLIP18.09■□□□□ 0.49
RPN1-202ENST00000476931 YWHAEP62258 255 aaKnown RBP18.09■□□□□ 0.49
RPN1-202ENST00000476931 ROR1Q01973 937 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 AAK1Q2M2I8 961 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 PUS10Q3MIT2 529 aaKnown RBP18.09■□□□□ 0.49
RPN1-202ENST00000476931 LRSAM1Q6UWE0 723 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 KREMEN2Q8NCW0 462 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 OR6B3Q8NGW1 331 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 KBTBD7Q8WVZ9 684 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 TNIP3Q96KP6 325 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 PI4K2AQ9BTU6 479 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 ZDHHC7Q9NXF8 308 aa18.09■□□□□ 0.49
RPN1-202ENST00000476931 LIMA1Q9UHB6 759 aaKnown RBP18.09■□□□□ 0.49
RPN1-202ENST00000476931 ADAM12O43184 909 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 EPCAMP16422 314 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 ARPP19P56211 112 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 ITIH3Q06033 890 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 IQCB1Q15051 598 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 EXOC3L4Q17RC7 722 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 LIN9Q5TKA1 542 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 ANKRD54Q6NXT1 300 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 GLYCTKQ8IVS8 523 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 DHX40Q8IX18 779 aaKnown RBP18.08■□□□□ 0.48
RPN1-202ENST00000476931 TCEAL8Q8IYN2 117 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 CMASQ8NFW8 434 aaPredicted RBP18.08■□□□□ 0.48
RPN1-202ENST00000476931 FAM200AQ8TCP9 573 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 JAKMIP2Q96AA8 810 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 NT5C1BQ96P26 610 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 RTP3Q9BQQ7 232 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 RHOBTB2Q9BYZ6 727 aa18.08■□□□□ 0.48
RPN1-202ENST00000476931 UBE2ZQ9H832 354 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms