RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 OBP2AQ9NY56 170 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 NCDNQ9UBB6 729 aa14.21□□□□□ -0.13
MRPL55-228ENST00000476267 MYBPHLA2RUH7 354 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 PAPSS2O95340 614 aaPredicted RBP14.2□□□□□ -0.14
MRPL55-228ENST00000476267 PRAMEF12O95522 483 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 BMP15O95972 392 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 ABCD1P33897 745 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 ALDH1A3P47895 512 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 ACOT2P49753 483 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 CCR3P51677 355 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 SATB1Q01826 763 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 POU5F1Q01860 360 aaKnown RBP14.2□□□□□ -0.14
MRPL55-228ENST00000476267 SF3A1Q15459 793 aaKnown RBP14.2□□□□□ -0.14
MRPL55-228ENST00000476267 RSPO4Q2I0M5 234 aaPredicted RBP14.2□□□□□ -0.14
MRPL55-228ENST00000476267 TXNDC11Q6PKC3 985 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 BRAPQ7Z569 592 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 EFCAB13Q8IY85 973 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 GPR161Q8N6U8 529 aaKnown RBP14.2□□□□□ -0.14
MRPL55-228ENST00000476267 SLITRK6Q9H5Y7 841 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 PARD6AQ9NPB6 346 aa14.2□□□□□ -0.14
MRPL55-228ENST00000476267 EP300Q09472 2414 aaPredicted RBP14.2□□□□□ -0.14
MRPL55-228ENST00000476267 SLC38A8A6NNN8 435 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 K7ESF4 209 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 FGF19O95750 216 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 GABRR2P28476 465 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 ADSSP30520 456 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 CTHP32929 405 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 DDIT3P35638 169 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 SOX9P48436 509 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 NRLP54845 237 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 PTPAQ15257 358 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 SLC39A12Q504Y0 691 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 LARP1BQ659C4 914 aaKnown RBP14.19□□□□□ -0.14
MRPL55-228ENST00000476267 C1orf228Q6PIY5 440 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 USP49Q70CQ1 688 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 ZNF720Q7Z2F6 126 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 LRRTM3Q86VH5 581 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 FAM212AQ96EL1 285 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 LPIN3Q9BQK8 851 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 C8orf33Q9H7E9 229 aaPredicted RBP14.19□□□□□ -0.14
MRPL55-228ENST00000476267 AGO2Q9UKV8 859 aaKnown RBP14.19□□□□□ -0.14
MRPL55-228ENST00000476267 SMC3Q9UQE7 1217 aa14.19□□□□□ -0.14
MRPL55-228ENST00000476267 SPECC1L-ADORA2AF8WAN1 911 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 TBCAO75347 108 aaKnown RBP14.18□□□□□ -0.14
MRPL55-228ENST00000476267 MCM2P49736 904 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 WNT7BP56706 349 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 DMWDQ09019 674 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 CCINQ13939 588 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 ARHGAP29Q52LW3 1261 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 GPR158Q5T848 1215 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 ADALQ6DHV7 355 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 SLFN12LQ6IEE8 588 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 ARMCX5Q6P1M9 558 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 Q6ZS52 159 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 TMEM150AQ86TG1 271 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 ITIH5Q86UX2 942 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 RALGPS2Q86X27 583 aaPredicted RBP14.18□□□□□ -0.14
MRPL55-228ENST00000476267 SFR1Q86XK3 245 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 GPIHBP1Q8IV16 184 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 SPEM1Q8N4L4 309 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 CXorf38Q8TB03 319 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 CSGALNACT1Q8TDX6 532 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 C2orf15Q8WU43 125 aaKnown RBP14.18□□□□□ -0.14
MRPL55-228ENST00000476267 HVCN1Q96D96 273 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 CHFRQ96EP1 664 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 EPSTI1Q96J88 318 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 ZFYVE19Q96K21 471 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 ATXN3LQ9H3M9 355 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 TASP1Q9H6P5 420 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 RBM12Q9NTZ6 932 aaKnown RBP14.18□□□□□ -0.14
MRPL55-228ENST00000476267 C2orf42Q9NWW7 574 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 DPP3Q9NY33 737 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 GTSE1Q9NYZ3 720 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 DSEQ9UL01 958 aa14.18□□□□□ -0.14
MRPL55-228ENST00000476267 CYB561D2O14569 222 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 KRT18P05783 430 aaKnown RBP14.17□□□□□ -0.14
MRPL55-228ENST00000476267 CXCL12P48061 93 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 TUFMP49411 452 aaKnown RBP14.17□□□□□ -0.14
MRPL55-228ENST00000476267 TAF6P49848 677 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 ATXN1P54253 815 aaKnown RBP14.17□□□□□ -0.14
MRPL55-228ENST00000476267 CYP4F8P98187 520 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 KCNA1Q09470 495 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 PPP2R5DQ14738 602 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 WSCD1Q658N2 575 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 YAF2Q8IY57 180 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 CELF5Q8N6W0 485 aaKnown RBP14.17□□□□□ -0.14
MRPL55-228ENST00000476267 ZSWIM2Q8NEG5 633 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 SPPL2BQ8TCT7 592 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 DNAJC19Q96DA6 116 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 SEPT5Q99719 369 aaPredicted RBP14.17□□□□□ -0.14
MRPL55-228ENST00000476267 SLC46A2Q9BY10 475 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 ZHX3Q9H4I2 956 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 FBXO2Q9UK22 296 aaPredicted RBP14.17□□□□□ -0.14
MRPL55-228ENST00000476267 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.17□□□□□ -0.14
MRPL55-228ENST00000476267 CLIC4Q9Y696 253 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 KIAA1549LQ6ZVL6 1849 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 GPR179Q6PRD1 2367 aa14.17□□□□□ -0.14
MRPL55-228ENST00000476267 KPNA7A9QM74 516 aa14.16□□□□□ -0.14
MRPL55-228ENST00000476267 HAPLN1P10915 354 aaPredicted RBP14.16□□□□□ -0.14
MRPL55-228ENST00000476267 HMGA1P17096 107 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms